RNA–Protein interactions for RNA: YHR053C

CUP1-1, Transcript of Metallothionein, yeastyeast

Gene CUP1-1, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-1YHR053C SPP2Q02521 185 aa2.2□□□□□ -2.06
CUP1-1YHR053C BEM2P39960 2167 aaKnown RBP2.19□□□□□ -2.06
CUP1-1YHR053C YKL070WP36087 169 aa2.19□□□□□ -2.06
CUP1-1YHR053C MAL32P38158 584 aa2.19□□□□□ -2.06
CUP1-1YHR053C YHL026CP38740 315 aa2.19□□□□□ -2.06
CUP1-1YHR053C YJL028WP47062 111 aa2.19□□□□□ -2.06
CUP1-1YHR053C MAL12P53341 584 aa2.19□□□□□ -2.06
CUP1-1YHR053C CTR3Q06686 241 aa2.19□□□□□ -2.06
CUP1-1YHR053C SLD7Q08457 257 aa2.19□□□□□ -2.06
CUP1-1YHR053C YPL247CQ12523 523 aa2.19□□□□□ -2.06
CUP1-1YHR053C GDH2P33327 1092 aaKnown RBP2.18□□□□□ -2.06
CUP1-1YHR053C HEK2P38199 381 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
CUP1-1YHR053C HSM3P38348 480 aa2.18□□□□□ -2.06
CUP1-1YHR053C MRPL49P40858 161 aaPredicted RBP2.18□□□□□ -2.06
CUP1-1YHR053C FMP33P46998 180 aa2.18□□□□□ -2.06
CUP1-1YHR053C DAN1P47178 298 aa2.18□□□□□ -2.06
CUP1-1YHR053C LSB1P53281 241 aa2.18□□□□□ -2.06
CUP1-1YHR053C COS6P53344 381 aa2.18□□□□□ -2.06
CUP1-1YHR053C ATC1Q04005 294 aa2.18□□□□□ -2.06
CUP1-1YHR053C PEX10Q05568 337 aa2.18□□□□□ -2.06
CUP1-1YHR053C BOP2Q06150 570 aa2.18□□□□□ -2.06
CUP1-1YHR053C EMC6Q12431 108 aa2.18□□□□□ -2.06
CUP1-1YHR053C COS2P0CX12 379 aa2.17□□□□□ -2.06
CUP1-1YHR053C COS3P0CX13 379 aa2.17□□□□□ -2.06
CUP1-1YHR053C NRG2P38082 220 aa2.17□□□□□ -2.06
CUP1-1YHR053C PRM9P39551 298 aa2.17□□□□□ -2.06
CUP1-1YHR053C TIF34P40217 347 aaKnown RBP2.17□□□□□ -2.06
CUP1-1YHR053C MNT4P53745 580 aa2.17□□□□□ -2.06
CUP1-1YHR053C GMC2Q06201 188 aa2.17□□□□□ -2.06
CUP1-1YHR053C ARV1Q06541 321 aa2.17□□□□□ -2.06
CUP1-1YHR053C GEP5Q12393 293 aa2.17□□□□□ -2.06
CUP1-1YHR053C STH1P32597 1359 aa2.17□□□□□ -2.06
CUP1-1YHR053C RPP0P05317 312 aaKnown RBP2.16□□□□□ -2.06
CUP1-1YHR053C MET16P18408 261 aaPredicted RBP2.16□□□□□ -2.06
CUP1-1YHR053C PPH21P23594 369 aa2.16□□□□□ -2.06
CUP1-1YHR053C CWP1P28319 239 aa2.16□□□□□ -2.06
CUP1-1YHR053C YHL049CP38722 271 aa2.16□□□□□ -2.06
CUP1-1YHR053C NBP1P52919 319 aaPredicted RBP2.16□□□□□ -2.06
CUP1-1YHR053C NBP35P52920 328 aa2.16□□□□□ -2.06
CUP1-1YHR053C AAH1P53909 347 aa2.16□□□□□ -2.06
CUP1-1YHR053C SWS2P53937 143 aa2.16□□□□□ -2.06
CUP1-1YHR053C CDC14Q00684 551 aa2.16□□□□□ -2.06
CUP1-1YHR053C SSK22P25390 1331 aaPredicted RBP2.16□□□□□ -2.06
CUP1-1YHR053C SSA3P09435 649 aaKnown RBP2.15□□□□□ -2.07
CUP1-1YHR053C EBP2P36049 427 aaKnown RBP2.15□□□□□ -2.07
CUP1-1YHR053C MDM34P53083 459 aa2.15□□□□□ -2.07
CUP1-1YHR053C PEX12Q04370 399 aa2.15□□□□□ -2.07
CUP1-1YHR053C GRE3P38715 327 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
CUP1-1YHR053C BAT2P47176 376 aaKnown RBP2.14□□□□□ -2.07
CUP1-1YHR053C CAB4P53332 305 aa2.14□□□□□ -2.07
CUP1-1YHR053C SME1Q12330 94 aaPredicted RBP2.14□□□□□ -2.07
CUP1-1YHR053C YJL118WP47022 219 aa2.13□□□□□ -2.07
CUP1-1YHR053C EMC2P47133 292 aaKnown RBP2.13□□□□□ -2.07
CUP1-1YHR053C ERV25P54837 211 aaKnown RBP2.13□□□□□ -2.07
CUP1-1YHR053C EMI1Q04406 187 aa2.13□□□□□ -2.07
CUP1-1YHR053C YHR086W-AQ3E746 53 aa2.13□□□□□ -2.07
CUP1-1YHR053C SAS5Q99314 248 aa2.13□□□□□ -2.07
CUP1-1YHR053C HIS1P00498 297 aaKnown RBP2.12□□□□□ -2.07
CUP1-1YHR053C ECM13P38195 257 aa2.12□□□□□ -2.07
CUP1-1YHR053C RRF1P38771 230 aa2.12□□□□□ -2.07
CUP1-1YHR053C DDI1P40087 428 aa2.12□□□□□ -2.07
CUP1-1YHR053C COA1P40452 197 aa2.12□□□□□ -2.07
CUP1-1YHR053C YJR012CP47087 207 aa2.12□□□□□ -2.07
CUP1-1YHR053C KAP114P53067 1004 aa2.12□□□□□ -2.07
CUP1-1YHR053C FKS1P38631 1876 aaKnown RBP2.11□□□□□ -2.07
CUP1-1YHR053C SCM4P32564 187 aa2.11□□□□□ -2.07
CUP1-1YHR053C YOR062CP36025 268 aa2.11□□□□□ -2.07
CUP1-1YHR053C ASI3P53983 676 aa2.11□□□□□ -2.07
CUP1-1YHR053C YBL008W-AQ3E821 79 aa2.11□□□□□ -2.07
CUP1-1YHR053C SSH1P38353 490 aaKnown RBP2.1□□□□□ -2.07
CUP1-1YHR053C MAL13P53338 473 aa2.1□□□□□ -2.07
CUP1-1YHR053C DCR2Q05924 578 aa2.1□□□□□ -2.07
CUP1-1YHR053C RPL24AP04449 155 aaKnown RBP2.09□□□□□ -2.07
CUP1-1YHR053C PUT1P09368 476 aa2.09□□□□□ -2.07
CUP1-1YHR053C POX1P13711 748 aa2.09□□□□□ -2.07
CUP1-1YHR053C YCR102CP25608 368 aa2.09□□□□□ -2.07
CUP1-1YHR053C RCY1P39531 840 aa2.09□□□□□ -2.07
CUP1-1YHR053C OST2P46964 130 aa2.09□□□□□ -2.07
CUP1-1YHR053C YJL027CP47063 138 aaPredicted RBP2.09□□□□□ -2.07
CUP1-1YHR053C OST6Q03723 332 aa2.09□□□□□ -2.07
CUP1-1YHR053C YPR011CQ12251 326 aa2.09□□□□□ -2.07
CUP1-1YHR053C YPL119C-AQ3E751 87 aa2.09□□□□□ -2.07
CUP1-1YHR053C MRP1P10662 321 aaKnown RBP2.08□□□□□ -2.08
CUP1-1YHR053C CCA1P21269 546 aa2.08□□□□□ -2.08
CUP1-1YHR053C DSN1P40568 576 aa2.08□□□□□ -2.08
CUP1-1YHR053C SNX4P47057 423 aa2.08□□□□□ -2.08
CUP1-1YHR053C EBS1Q03466 884 aaKnown RBP2.08□□□□□ -2.08
CUP1-1YHR053C MHT1Q12525 324 aa2.08□□□□□ -2.08
CUP1-1YHR053C ADH3P07246 375 aaKnown RBP2.07□□□□□ -2.08
CUP1-1YHR053C SGA1P08019 549 aa2.07□□□□□ -2.08
CUP1-1YHR053C VPS3P23643 1011 aa2.07□□□□□ -2.08
CUP1-1YHR053C RCN1P36054 211 aa2.07□□□□□ -2.08
CUP1-1YHR053C RPL10P41805 221 aaKnown RBP2.07□□□□□ -2.08
CUP1-1YHR053C FCY21P40039 528 aa2.06□□□□□ -2.08
CUP1-1YHR053C ALG11P53954 548 aaKnown RBP2.06□□□□□ -2.08
CUP1-1YHR053C YDR124WQ04608 324 aa2.06□□□□□ -2.08
CUP1-1YHR053C SEC22P22214 214 aa2.05□□□□□ -2.08
CUP1-1YHR053C DOA4P32571 926 aa2.05□□□□□ -2.08
CUP1-1YHR053C MRPL37P36532 105 aa2.05□□□□□ -2.08
CUP1-1YHR053C PET100P38958 111 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 95.2 ms