RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C LCB4Q12246 624 aa3.28□□□□□ -1.88
PDX1YGR193C DGK1Q12382 290 aa3.28□□□□□ -1.88
PDX1YGR193C AIM45Q12480 344 aaKnown RBP3.28□□□□□ -1.88
PDX1YGR193C YLR099W-AQ3E798 87 aa3.28□□□□□ -1.88
PDX1YGR193C YKL033W-AQ86ZR7 236 aa3.28□□□□□ -1.88
PDX1YGR193C CHO1P08456 276 aa3.27□□□□□ -1.89
PDX1YGR193C RPL31BP0C2H9 113 aaKnown RBP3.27□□□□□ -1.89
PDX1YGR193C PBI2P0CT04 75 aaKnown RBP3.27□□□□□ -1.89
PDX1YGR193C ERD1P16151 362 aa3.27□□□□□ -1.89
PDX1YGR193C PHO80P20052 293 aa3.27□□□□□ -1.89
PDX1YGR193C IME1P21190 360 aa3.27□□□□□ -1.89
PDX1YGR193C SGV1P23293 657 aaKnown RBP3.27□□□□□ -1.89
PDX1YGR193C YSC83P32792 385 aa3.27□□□□□ -1.89
PDX1YGR193C SFC1P33303 322 aa3.27□□□□□ -1.89
PDX1YGR193C YKL075CP36083 450 aa3.27□□□□□ -1.89
PDX1YGR193C DOG2P38773 246 aa3.27□□□□□ -1.89
PDX1YGR193C LSM4P40070 187 aaKnown RBP3.27□□□□□ -1.89
PDX1YGR193C MRPL49P40858 161 aaPredicted RBP3.27□□□□□ -1.89
PDX1YGR193C AZF1P41696 914 aa3.27□□□□□ -1.89
PDX1YGR193C FAR3P46671 204 aa3.27□□□□□ -1.89
PDX1YGR193C COS10P52924 374 aa3.27□□□□□ -1.89
PDX1YGR193C VEL1P53058 206 aa3.27□□□□□ -1.89
PDX1YGR193C FLC3P53121 802 aa3.27□□□□□ -1.89
PDX1YGR193C PEX31P53203 462 aa3.27□□□□□ -1.89
PDX1YGR193C TAM41P53230 385 aa3.27□□□□□ -1.89
PDX1YGR193C MSO1P53604 210 aaKnown RBP3.27□□□□□ -1.89
PDX1YGR193C TEX1P53851 422 aaKnown RBP3.27□□□□□ -1.89
PDX1YGR193C LEE1Q02799 301 aaKnown RBP3.27□□□□□ -1.89
PDX1YGR193C CGI121Q03705 181 aaKnown RBP3.27□□□□□ -1.89
PDX1YGR193C TSA2Q04120 196 aa3.27□□□□□ -1.89
PDX1YGR193C NAT4Q04751 285 aa3.27□□□□□ -1.89
PDX1YGR193C TVP18Q04767 167 aa3.27□□□□□ -1.89
PDX1YGR193C RKI1Q12189 258 aa3.27□□□□□ -1.89
PDX1YGR193C GTT2Q12390 233 aa3.27□□□□□ -1.89
PDX1YGR193C GEP5Q12393 293 aa3.27□□□□□ -1.89
PDX1YGR193C COX3P00420 269 aa3.26□□□□□ -1.89
PDX1YGR193C VAR1P02381 398 aa3.26□□□□□ -1.89
PDX1YGR193C LRE1P25579 583 aaKnown RBP3.26□□□□□ -1.89
PDX1YGR193C YCR102CP25608 368 aa3.26□□□□□ -1.89
PDX1YGR193C TAH1P25638 111 aaPredicted RBP3.26□□□□□ -1.89
PDX1YGR193C POP5P28005 173 aa3.26□□□□□ -1.89
PDX1YGR193C PEX4P29340 183 aa3.26□□□□□ -1.89
PDX1YGR193C SCM4P32564 187 aa3.26□□□□□ -1.89
PDX1YGR193C SEC17P32602 292 aa3.26□□□□□ -1.89
PDX1YGR193C SHE2P36068 246 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
PDX1YGR193C SWD2P36104 329 aaPredicted RBP3.26□□□□□ -1.89
PDX1YGR193C PRY2P36110 329 aa3.26□□□□□ -1.89
PDX1YGR193C YKR041WP36134 250 aa3.26□□□□□ -1.89
PDX1YGR193C QDR3P38227 689 aa3.26□□□□□ -1.89
PDX1YGR193C YGP1P38616 354 aaKnown RBP3.26□□□□□ -1.89
PDX1YGR193C RPS20P38701 121 aaKnown RBP3.26□□□□□ -1.89
PDX1YGR193C AYR1P40471 297 aa3.26□□□□□ -1.89
PDX1YGR193C TAD2P47058 250 aa3.26□□□□□ -1.89
PDX1YGR193C YJR079WP47126 109 aa3.26□□□□□ -1.89
PDX1YGR193C XPT1P47165 209 aa3.26□□□□□ -1.89
PDX1YGR193C PMT5P52867 743 aa3.26□□□□□ -1.89
PDX1YGR193C COX18P53239 316 aa3.26□□□□□ -1.89
PDX1YGR193C CTL1Q03220 320 aaKnown RBP3.26□□□□□ -1.89
PDX1YGR193C YET2Q04210 160 aa3.26□□□□□ -1.89
PDX1YGR193C TAF9Q05027 157 aa3.26□□□□□ -1.89
PDX1YGR193C INM2Q05533 292 aa3.26□□□□□ -1.89
PDX1YGR193C MDM30Q05930 598 aa3.26□□□□□ -1.89
PDX1YGR193C ARC18Q05933 178 aaKnown RBP3.26□□□□□ -1.89
PDX1YGR193C YLR177WQ06251 628 aa3.26□□□□□ -1.89
PDX1YGR193C MCH1Q07376 486 aa3.26□□□□□ -1.89
PDX1YGR193C YLR030WQ07967 263 aa3.26□□□□□ -1.89
PDX1YGR193C YOR387CQ08910 206 aa3.26□□□□□ -1.89
PDX1YGR193C FRE7Q12333 620 aa3.26□□□□□ -1.89
PDX1YGR193C ERP3Q12403 225 aa3.26□□□□□ -1.89
PDX1YGR193C PRM4Q12498 284 aa3.26□□□□□ -1.89
PDX1YGR193C ECM3Q99252 613 aa3.26□□□□□ -1.89
PDX1YGR193C HRP1Q99383 534 aaKnown RBP3.26□□□□□ -1.89
PDX1YGR193C LTE1P07866 1435 aa3.26□□□□□ -1.89
PDX1YGR193C YPK9Q12697 1472 aa3.25□□□□□ -1.89
PDX1YGR193C RHO2P06781 192 aa3.25□□□□□ -1.89
PDX1YGR193C RIP1P08067 215 aa3.25□□□□□ -1.89
PDX1YGR193C YML003WP0CF16 290 aa3.25□□□□□ -1.89
PDX1YGR193C STF2P16965 84 aa3.25□□□□□ -1.89
PDX1YGR193C PHO85P17157 305 aa3.25□□□□□ -1.89
PDX1YGR193C MAG1P22134 296 aaKnown RBP3.25□□□□□ -1.89
PDX1YGR193C TKL1P23254 680 aaKnown RBP3.25□□□□□ -1.89
PDX1YGR193C CDC50P25656 391 aa3.25□□□□□ -1.89
PDX1YGR193C ACB1P31787 87 aa3.25□□□□□ -1.89
PDX1YGR193C ARO7P32178 256 aa3.25□□□□□ -1.89
PDX1YGR193C NTF2P33331 125 aaKnown RBP3.25□□□□□ -1.89
PDX1YGR193C SKN1P33336 771 aa3.25□□□□□ -1.89
PDX1YGR193C FRE2P36033 711 aa3.25□□□□□ -1.89
PDX1YGR193C YPT35P38815 214 aaKnown RBP3.25□□□□□ -1.89
PDX1YGR193C YHR177WP38867 453 aa3.25□□□□□ -1.89
PDX1YGR193C YEA6P39953 335 aa3.25□□□□□ -1.89
PDX1YGR193C SMB1P40018 196 aaKnown RBP3.25□□□□□ -1.89
PDX1YGR193C GLE2P40066 365 aa3.25□□□□□ -1.89
PDX1YGR193C GAT2P40209 560 aa3.25□□□□□ -1.89
PDX1YGR193C YMR144WP40214 342 aaKnown RBP3.25□□□□□ -1.89
PDX1YGR193C GLR1P41921 483 aaKnown RBP3.25□□□□□ -1.89
PDX1YGR193C GNA1P43577 159 aaPredicted RBP3.25□□□□□ -1.89
PDX1YGR193C AIM23P47015 356 aa3.25□□□□□ -1.89
PDX1YGR193C OST3P48439 350 aa3.25□□□□□ -1.89
PDX1YGR193C AVT4P50944 713 aa3.25□□□□□ -1.89
PDX1YGR193C ERV14P53173 138 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms