RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C YIL029CP40538 142 aa1.04□□□□□ -2.24
SEC3YER008C EFM5P53200 248 aaKnown RBP1.04□□□□□ -2.24
SEC3YER008C SNZ2P53824 298 aa1.04□□□□□ -2.24
SEC3YER008C SWS2P53937 143 aa1.04□□□□□ -2.24
SEC3YER008C SUR7P54003 302 aa1.04□□□□□ -2.24
SEC3YER008C YMR166CQ03829 368 aa1.04□□□□□ -2.24
SEC3YER008C LIP2Q06005 328 aa1.04□□□□□ -2.24
SEC3YER008C AYT1Q12226 474 aa1.04□□□□□ -2.24
SEC3YER008C SWI1P09547 1314 aa1.03□□□□□ -2.24
SEC3YER008C TRP1P00912 224 aa1.03□□□□□ -2.24
SEC3YER008C RPS3P05750 240 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C STE7P06784 515 aa1.03□□□□□ -2.24
SEC3YER008C PET494P07390 489 aaPredicted RBP1.03□□□□□ -2.24
SEC3YER008C RPL23AP0CX41 137 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C RPL23BP0CX42 137 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C YER190C-BP0CX94 160 aa1.03□□□□□ -2.24
SEC3YER008C YEL077W-AP0CX95 160 aa1.03□□□□□ -2.24
SEC3YER008C YGR296C-BP0CX96 160 aa1.03□□□□□ -2.24
SEC3YER008C YPL283W-BP0CX97 160 aa1.03□□□□□ -2.24
SEC3YER008C YPR204C-AP0CX98 160 aa1.03□□□□□ -2.24
SEC3YER008C TFS1P14306 219 aa1.03□□□□□ -2.24
SEC3YER008C FBA1P14540 359 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C MCK1P21965 375 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C DCC1P25559 380 aa1.03□□□□□ -2.24
SEC3YER008C IDH1P28834 360 aaKnown RBP RIP-Chip data1.03□□□□□ -2.24not detected
SEC3YER008C EFB1P32471 206 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C KAR9P32526 644 aa1.03□□□□□ -2.24
SEC3YER008C NPT1P39683 429 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C YMR134WP40207 237 aa1.03□□□□□ -2.24
SEC3YER008C YIL152WP40455 235 aa1.03□□□□□ -2.24
SEC3YER008C AVT7P40501 490 aa1.03□□□□□ -2.24
SEC3YER008C SNZ3P43545 298 aa1.03□□□□□ -2.24
SEC3YER008C TPN1P53099 579 aa1.03□□□□□ -2.24
SEC3YER008C SLX9P53251 210 aaPredicted RBP1.03□□□□□ -2.24
SEC3YER008C ASI3P53983 676 aa1.03□□□□□ -2.24
SEC3YER008C PET191Q02772 108 aa1.03□□□□□ -2.24
SEC3YER008C YLR283WQ05867 314 aa1.03□□□□□ -2.24
SEC3YER008C GRX8Q05926 109 aa1.03□□□□□ -2.24
SEC3YER008C YLR179CQ06252 201 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C USB1Q12208 290 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C SEY1Q99287 776 aa1.03□□□□□ -2.24
SEC3YER008C STT4P37297 1900 aa1.03□□□□□ -2.24
SEC3YER008C HHF1P02309 103 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C RPL27AP0C2H6 136 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C RPL27BP0C2H7 136 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C YAK1P14680 807 aa1.03□□□□□ -2.24
SEC3YER008C CDC23P16522 626 aa1.03□□□□□ -2.24
SEC3YER008C INO2P26798 304 aa1.03□□□□□ -2.24
SEC3YER008C MEI5P32489 222 aa1.03□□□□□ -2.24
SEC3YER008C YKR041WP36134 250 aa1.03□□□□□ -2.24
SEC3YER008C CSM2P40465 213 aa1.03□□□□□ -2.24
SEC3YER008C PRM10P42946 383 aa1.03□□□□□ -2.24
SEC3YER008C RPC17P47076 161 aa1.03□□□□□ -2.24
SEC3YER008C MRS2Q01926 470 aa1.03□□□□□ -2.24
SEC3YER008C YMR317WQ04893 1140 aa1.03□□□□□ -2.24
SEC3YER008C DPP1Q05521 289 aa1.03□□□□□ -2.24
SEC3YER008C NDE2Q07500 545 aa1.03□□□□□ -2.24
SEC3YER008C YOL160WQ08321 113 aa1.03□□□□□ -2.24
SEC3YER008C ABP140Q08641 628 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C FCY22Q12119 530 aa1.03□□□□□ -2.24
SEC3YER008C UTP23Q12339 254 aaKnown RBP1.03□□□□□ -2.24
SEC3YER008C YOS9Q99220 542 aa1.03□□□□□ -2.24
SEC3YER008C RPL24BP24000 155 aaKnown RBP1.03□□□□□ -2.25
SEC3YER008C CDC50P25656 391 aa1.03□□□□□ -2.25
SEC3YER008C ITR2P30606 609 aa1.03□□□□□ -2.25
SEC3YER008C SPO23P33757 523 aa1.03□□□□□ -2.25
SEC3YER008C GRE3P38715 327 aaKnown RBP RIP-Chip data1.03□□□□□ -2.25not detected
SEC3YER008C YHL049CP38722 271 aa1.03□□□□□ -2.25
SEC3YER008C YHR035WP38769 630 aa1.03□□□□□ -2.25
SEC3YER008C SEC72P39742 193 aaKnown RBP1.03□□□□□ -2.25
SEC3YER008C COG3P40094 801 aa1.03□□□□□ -2.25
SEC3YER008C YNL320WP42840 284 aa1.03□□□□□ -2.25
SEC3YER008C COX16P47081 118 aa1.03□□□□□ -2.25
SEC3YER008C UBC13P52490 153 aa1.03□□□□□ -2.25
SEC3YER008C GTR2P53290 341 aa1.03□□□□□ -2.25
SEC3YER008C FMP41P53889 259 aaKnown RBP1.03□□□□□ -2.25
SEC3YER008C RNY1Q02933 434 aaKnown RBP1.03□□□□□ -2.25
SEC3YER008C YDL199CQ12407 687 aa1.03□□□□□ -2.25
SEC3YER008C SNF6P18888 332 aa1.02□□□□□ -2.25
SEC3YER008C HOM6P31116 359 aaKnown RBP1.02□□□□□ -2.25
SEC3YER008C AVT5P38176 459 aa1.02□□□□□ -2.25
SEC3YER008C AME1P38313 324 aa1.02□□□□□ -2.25
SEC3YER008C GOS1P38736 223 aa1.02□□□□□ -2.25
SEC3YER008C RPL10P41805 221 aaKnown RBP1.02□□□□□ -2.25
SEC3YER008C NBP35P52920 328 aa1.02□□□□□ -2.25
SEC3YER008C MRPL50P53724 139 aa1.02□□□□□ -2.25
SEC3YER008C HCH1P53834 153 aa1.02□□□□□ -2.25
SEC3YER008C YLR460CP54007 376 aa1.02□□□□□ -2.25
SEC3YER008C YMR114CQ04471 368 aaKnown RBP1.02□□□□□ -2.25
SEC3YER008C LOT6Q07923 191 aa1.02□□□□□ -2.25
SEC3YER008C RDL2Q08742 149 aaKnown RBP1.02□□□□□ -2.25
SEC3YER008C YPL278CQ08990 100 aa1.02□□□□□ -2.25
SEC3YER008C LAG2Q92325 660 aa1.02□□□□□ -2.25
SEC3YER008C RNA14P25298 677 aaKnown RBP1.02□□□□□ -2.25
SEC3YER008C UBC6P33296 250 aaPredicted RBP1.02□□□□□ -2.25
SEC3YER008C CSE2P33308 149 aa1.02□□□□□ -2.25
SEC3YER008C YBL059WP34224 193 aa1.02□□□□□ -2.25
SEC3YER008C MCH2P36032 473 aa1.02□□□□□ -2.25
SEC3YER008C YBL081WP38180 368 aaKnown RBP1.02□□□□□ -2.25
SEC3YER008C ECM13P38195 257 aa1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 80.9 ms