RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C YPL119C-AQ3E751 87 aa3.31□□□□□ -1.88
LSM6YDR378C HIS3P06633 220 aa3.3□□□□□ -1.88
LSM6YDR378C RAD3P06839 778 aa3.3□□□□□ -1.88
LSM6YDR378C QRI5P32344 111 aa3.3□□□□□ -1.88
LSM6YDR378C DSN1P40568 576 aa3.3□□□□□ -1.88
LSM6YDR378C NBP1P52919 319 aaPredicted RBP3.3□□□□□ -1.88
LSM6YDR378C YBL112CQ3E7Y4 105 aa3.3□□□□□ -1.88
LSM6YDR378C KRE1P17260 313 aa3.29□□□□□ -1.88
LSM6YDR378C COY1P34237 679 aa3.29□□□□□ -1.88
LSM6YDR378C YKR032WP36127 104 aa3.29□□□□□ -1.88
LSM6YDR378C SDH4P37298 181 aa3.29□□□□□ -1.88
LSM6YDR378C BIG1P38813 335 aa3.29□□□□□ -1.88
LSM6YDR378C AAH1P53909 347 aa3.29□□□□□ -1.88
LSM6YDR378C RRN5Q02983 363 aa3.29□□□□□ -1.88
LSM6YDR378C YMR166CQ03829 368 aa3.29□□□□□ -1.88
LSM6YDR378C HRT1Q08273 121 aa3.29□□□□□ -1.88
LSM6YDR378C FEX1Q08913 375 aa3.29□□□□□ -1.88
LSM6YDR378C FEX2Q08991 375 aa3.29□□□□□ -1.88
LSM6YDR378C TDH2P00358 332 aaKnown RBP3.28□□□□□ -1.88
LSM6YDR378C COS2P0CX12 379 aa3.28□□□□□ -1.88
LSM6YDR378C COS3P0CX13 379 aa3.28□□□□□ -1.88
LSM6YDR378C POX1P13711 748 aa3.28□□□□□ -1.88
LSM6YDR378C CWP1P28319 239 aa3.28□□□□□ -1.88
LSM6YDR378C PRS4P38063 326 aaPredicted RBP3.28□□□□□ -1.88
LSM6YDR378C SPT8P38915 602 aa3.28□□□□□ -1.88
LSM6YDR378C YER084WP40057 128 aa3.28□□□□□ -1.88
LSM6YDR378C DIA1P54005 336 aa3.28□□□□□ -1.88
LSM6YDR378C YLR173WQ06247 608 aa3.28□□□□□ -1.88
LSM6YDR378C SDO1Q07953 250 aaKnown RBP3.28□□□□□ -1.88
LSM6YDR378C SMT3Q12306 101 aaKnown RBP3.28□□□□□ -1.88
LSM6YDR378C RPT5P33297 434 aaKnown RBP3.27□□□□□ -1.89
LSM6YDR378C TEM1P38987 245 aa3.27□□□□□ -1.89
LSM6YDR378C AGX1P43567 385 aa3.27□□□□□ -1.89
LSM6YDR378C MED4Q12343 284 aa3.27□□□□□ -1.89
LSM6YDR378C SNF8Q12483 233 aa3.27□□□□□ -1.89
LSM6YDR378C SFC1P33303 322 aa3.26□□□□□ -1.89
LSM6YDR378C MRX3P38172 270 aa3.26□□□□□ -1.89
LSM6YDR378C BNA6P43619 295 aa3.26□□□□□ -1.89
LSM6YDR378C SYF2P53277 215 aaPredicted RBP3.26□□□□□ -1.89
LSM6YDR378C ATG17Q06410 417 aa3.26□□□□□ -1.89
LSM6YDR378C PLB3Q08108 686 aa3.26□□□□□ -1.89
LSM6YDR378C SLD7Q08457 257 aa3.26□□□□□ -1.89
LSM6YDR378C PST1Q12355 444 aa3.26□□□□□ -1.89
LSM6YDR378C DPB2P24482 689 aaPredicted RBP3.25□□□□□ -1.89
LSM6YDR378C RNA15P25299 296 aaPredicted RBP3.25□□□□□ -1.89
LSM6YDR378C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
LSM6YDR378C JEN1P36035 616 aa3.25□□□□□ -1.89
LSM6YDR378C YJL028WP47062 111 aa3.25□□□□□ -1.89
LSM6YDR378C YJR141WP47172 347 aaPredicted RBP3.25□□□□□ -1.89
LSM6YDR378C YNL134CP53912 376 aaKnown RBP3.25□□□□□ -1.89
LSM6YDR378C ASI3P53983 676 aa3.25□□□□□ -1.89
LSM6YDR378C FCF1Q05498 189 aaPredicted RBP3.25□□□□□ -1.89
LSM6YDR378C BOP2Q06150 570 aa3.25□□□□□ -1.89
LSM6YDR378C TOM40P23644 387 aaKnown RBP3.24□□□□□ -1.89
LSM6YDR378C MAL32P38158 584 aa3.24□□□□□ -1.89
LSM6YDR378C SMB1P40018 196 aaKnown RBP3.24□□□□□ -1.89
LSM6YDR378C MAL12P53341 584 aa3.24□□□□□ -1.89
LSM6YDR378C CLP1Q08685 445 aaPredicted RBP3.24□□□□□ -1.89
LSM6YDR378C YOR029WQ12243 111 aa3.24□□□□□ -1.89
LSM6YDR378C RNP1P32385 249 aa3.23□□□□□ -1.89
LSM6YDR378C UTR5P32630 166 aa3.23□□□□□ -1.89
LSM6YDR378C YHR045WP38775 560 aa3.23□□□□□ -1.89
LSM6YDR378C YER188WP40103 239 aa3.23□□□□□ -1.89
LSM6YDR378C MRPL50P53724 139 aa3.23□□□□□ -1.89
LSM6YDR378C YPR147CQ06522 304 aaKnown RBP3.23□□□□□ -1.89
LSM6YDR378C YBL008W-AQ3E821 79 aa3.23□□□□□ -1.89
LSM6YDR378C RAD10P06838 210 aa3.22□□□□□ -1.89
LSM6YDR378C FZO1P38297 855 aa3.22□□□□□ -1.89
LSM6YDR378C SSH1P38353 490 aaKnown RBP3.22□□□□□ -1.89
LSM6YDR378C PIR5P46999 287 aa3.22□□□□□ -1.89
LSM6YDR378C USE1P53146 245 aa3.22□□□□□ -1.89
LSM6YDR378C MSH5Q12175 901 aa3.22□□□□□ -1.89
LSM6YDR378C YPL247CQ12523 523 aa3.22□□□□□ -1.89
LSM6YDR378C HOM6P31116 359 aaKnown RBP3.21□□□□□ -1.9
LSM6YDR378C GLG2P47011 380 aa3.21□□□□□ -1.9
LSM6YDR378C YPR098CQ06089 161 aa3.21□□□□□ -1.9
LSM6YDR378C PAM18Q07914 168 aa3.21□□□□□ -1.9
LSM6YDR378C RRS1Q08746 203 aaKnown RBP3.21□□□□□ -1.9
LSM6YDR378C CSM4Q08955 156 aa3.21□□□□□ -1.9
LSM6YDR378C SNU23Q12368 194 aaPredicted RBP3.21□□□□□ -1.9
LSM6YDR378C AGC1Q12482 902 aa3.21□□□□□ -1.9
LSM6YDR378C NOT5Q12514 560 aaPredicted RBP3.21□□□□□ -1.9
LSM6YDR378C GDH2P33327 1092 aaKnown RBP3.2□□□□□ -1.9
LSM6YDR378C SGE1P33335 543 aa3.2□□□□□ -1.9
LSM6YDR378C DRE2P36152 348 aa3.2□□□□□ -1.9
LSM6YDR378C MIX17Q03667 156 aa3.2□□□□□ -1.9
LSM6YDR378C EMI1Q04406 187 aa3.2□□□□□ -1.9
LSM6YDR378C MRPL39P36533 70 aa3.19□□□□□ -1.9
LSM6YDR378C FMC1P40491 155 aa3.19□□□□□ -1.9
LSM6YDR378C SNZ3P43545 298 aa3.19□□□□□ -1.9
LSM6YDR378C MDM34P53083 459 aa3.19□□□□□ -1.9
LSM6YDR378C SSU72P53538 206 aaPredicted RBP3.19□□□□□ -1.9
LSM6YDR378C YDR124WQ04608 324 aa3.19□□□□□ -1.9
LSM6YDR378C COQ10Q08058 207 aa3.19□□□□□ -1.9
LSM6YDR378C YCT1Q12235 531 aa3.19□□□□□ -1.9
LSM6YDR378C YPR011CQ12251 326 aa3.19□□□□□ -1.9
LSM6YDR378C GEP5Q12393 293 aa3.19□□□□□ -1.9
LSM6YDR378C ATG31Q12421 196 aa3.19□□□□□ -1.9
LSM6YDR378C YKR104WP0CE69 306 aa3.18□□□□□ -1.9
LSM6YDR378C PPH21P23594 369 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms