RNA–Protein interactions for RNA: YBR111W-A

SUS1, Transcript of Component of both the SAGA histone acetylase and TREX-2 complexes, yeastyeast

Gene SUS1, Length 291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUS1YBR111W-A RDS3Q06835 107 aaPredicted RBP1.9□□□□□ -2.11
SUS1YBR111W-A SME1Q12330 94 aaPredicted RBP1.9□□□□□ -2.11
SUS1YBR111W-A NOT5Q12514 560 aaPredicted RBP1.9□□□□□ -2.11
SUS1YBR111W-A YPL247CQ12523 523 aa1.9□□□□□ -2.11
SUS1YBR111W-A RPL24AP04449 155 aaKnown RBP1.89□□□□□ -2.11
SUS1YBR111W-A DPM1P14020 267 aaKnown RBP1.89□□□□□ -2.11
SUS1YBR111W-A SNF6P18888 332 aa1.89□□□□□ -2.11
SUS1YBR111W-A RIB7P33312 244 aa1.89□□□□□ -2.11
SUS1YBR111W-A YHR045WP38775 560 aa1.89□□□□□ -2.11
SUS1YBR111W-A PRM9P39551 298 aa1.89□□□□□ -2.11
SUS1YBR111W-A AGX1P43567 385 aa1.89□□□□□ -2.11
SUS1YBR111W-A NBP1P52919 319 aaPredicted RBP1.89□□□□□ -2.11
SUS1YBR111W-A MAL13P53338 473 aa1.89□□□□□ -2.11
SUS1YBR111W-A GRH1Q04410 372 aaKnown RBP1.89□□□□□ -2.11
SUS1YBR111W-A COX20Q04935 205 aa1.89□□□□□ -2.11
SUS1YBR111W-A PEX10Q05568 337 aa1.89□□□□□ -2.11
SUS1YBR111W-A SMT3Q12306 101 aaKnown RBP1.89□□□□□ -2.11
SUS1YBR111W-A COX2P00410 251 aa1.88□□□□□ -2.11
SUS1YBR111W-A HIS1P00498 297 aaKnown RBP1.88□□□□□ -2.11
SUS1YBR111W-A RPL26AP05743 127 aaKnown RBP1.88□□□□□ -2.11
SUS1YBR111W-A PPH21P23594 369 aa1.88□□□□□ -2.11
SUS1YBR111W-A CLB6P32943 380 aa1.88□□□□□ -2.11
SUS1YBR111W-A GDH2P33327 1092 aaKnown RBP1.88□□□□□ -2.11
SUS1YBR111W-A SPT8P38915 602 aa1.88□□□□□ -2.11
SUS1YBR111W-A PET100P38958 111 aa1.88□□□□□ -2.11
SUS1YBR111W-A TEM1P38987 245 aa1.88□□□□□ -2.11
SUS1YBR111W-A GON7P46984 123 aa1.88□□□□□ -2.11
SUS1YBR111W-A YJL118WP47022 219 aa1.88□□□□□ -2.11
SUS1YBR111W-A YJR012CP47087 207 aa1.88□□□□□ -2.11
SUS1YBR111W-A YJR146WP47174 117 aa1.88□□□□□ -2.11
SUS1YBR111W-A DSK2P48510 373 aa1.88□□□□□ -2.11
SUS1YBR111W-A MDM34P53083 459 aa1.88□□□□□ -2.11
SUS1YBR111W-A RPL26BP53221 127 aaKnown RBP1.88□□□□□ -2.11
SUS1YBR111W-A AAH1P53909 347 aa1.88□□□□□ -2.11
SUS1YBR111W-A EMI1Q04406 187 aa1.88□□□□□ -2.11
SUS1YBR111W-A MYO5Q04439 1219 aaKnown RBP1.88□□□□□ -2.11
SUS1YBR111W-A YMR114CQ04471 368 aaKnown RBP1.88□□□□□ -2.11
SUS1YBR111W-A PLB3Q08108 686 aa1.88□□□□□ -2.11
SUS1YBR111W-A MAL32P38158 584 aa1.87□□□□□ -2.11
SUS1YBR111W-A MEP1P40260 492 aa1.87□□□□□ -2.11
SUS1YBR111W-A DSN1P40568 576 aa1.87□□□□□ -2.11
SUS1YBR111W-A MAL12P53341 584 aa1.87□□□□□ -2.11
SUS1YBR111W-A MPP6P53725 186 aaPredicted RBP1.87□□□□□ -2.11
SUS1YBR111W-A EBS1Q03466 884 aaKnown RBP1.87□□□□□ -2.11
SUS1YBR111W-A SPO77Q06134 477 aa1.87□□□□□ -2.11
SUS1YBR111W-A BOP2Q06150 570 aa1.87□□□□□ -2.11
SUS1YBR111W-A SUE1Q06524 206 aa1.87□□□□□ -2.11
SUS1YBR111W-A VPS68Q12016 184 aa1.87□□□□□ -2.11
SUS1YBR111W-A GEP5Q12393 293 aa1.87□□□□□ -2.11
SUS1YBR111W-A MRP1P10662 321 aaKnown RBP1.86□□□□□ -2.11
SUS1YBR111W-A RNP1P32385 249 aa1.86□□□□□ -2.11
SUS1YBR111W-A ECM13P38195 257 aa1.86□□□□□ -2.11
SUS1YBR111W-A MNN5P46982 586 aa1.86□□□□□ -2.11
SUS1YBR111W-A CAB4P53332 305 aa1.86□□□□□ -2.11
SUS1YBR111W-A ALG11P53954 548 aaKnown RBP1.86□□□□□ -2.11
SUS1YBR111W-A ADH6Q04894 360 aaKnown RBP1.86□□□□□ -2.11
SUS1YBR111W-A SLD7Q08457 257 aa1.86□□□□□ -2.11
SUS1YBR111W-A PST1Q12355 444 aa1.86□□□□□ -2.11
SUS1YBR111W-A RRP36Q12481 300 aaPredicted RBP1.86□□□□□ -2.11
SUS1YBR111W-A YPL119C-AQ3E751 87 aa1.86□□□□□ -2.11
SUS1YBR111W-A FKS1P38631 1876 aaKnown RBP1.86□□□□□ -2.11
SUS1YBR111W-A POL30P15873 258 aaKnown RBP1.85□□□□□ -2.11
SUS1YBR111W-A CWP1P28319 239 aa1.85□□□□□ -2.11
SUS1YBR111W-A QRI5P32344 111 aa1.85□□□□□ -2.11
SUS1YBR111W-A DRE2P36152 348 aa1.85□□□□□ -2.11
SUS1YBR111W-A PRS2P38620 318 aaKnown RBP1.85□□□□□ -2.11
SUS1YBR111W-A COG3P40094 801 aa1.85□□□□□ -2.11
SUS1YBR111W-A YAR1P46683 200 aa1.85□□□□□ -2.11
SUS1YBR111W-A YJL016WP47072 561 aa1.85□□□□□ -2.11
SUS1YBR111W-A TY3A-GQ12173 290 aa1.85□□□□□ -2.11
SUS1YBR111W-A TY3A-IQ99219 290 aa1.85□□□□□ -2.11
SUS1YBR111W-A RAD3P06839 778 aa1.84□□□□□ -2.11
SUS1YBR111W-A POX1P13711 748 aa1.84□□□□□ -2.11
SUS1YBR111W-A RPL10P41805 221 aaKnown RBP1.84□□□□□ -2.11
SUS1YBR111W-A SLM2P53955 656 aa1.84□□□□□ -2.11
SUS1YBR111W-A YPR011CQ12251 326 aa1.84□□□□□ -2.11
SUS1YBR111W-A DAL82P21705 255 aa1.83□□□□□ -2.12
SUS1YBR111W-A SKI2P35207 1287 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
SUS1YBR111W-A TIF34P40217 347 aaKnown RBP1.83□□□□□ -2.12
SUS1YBR111W-A CGI121Q03705 181 aaKnown RBP1.83□□□□□ -2.12
SUS1YBR111W-A KAP95Q06142 861 aaKnown RBP1.83□□□□□ -2.12
SUS1YBR111W-A SNF8Q12483 233 aa1.83□□□□□ -2.12
SUS1YBR111W-A YBL008W-AQ3E821 79 aa1.83□□□□□ -2.12
SUS1YBR111W-A BEM2P39960 2167 aaKnown RBP1.82□□□□□ -2.12
SUS1YBR111W-A VPS3P23643 1011 aa1.82□□□□□ -2.12
SUS1YBR111W-A SMB1P40018 196 aaKnown RBP1.82□□□□□ -2.12
SUS1YBR111W-A YGL034CP53186 121 aa1.82□□□□□ -2.12
SUS1YBR111W-A COS6P53344 381 aa1.82□□□□□ -2.12
SUS1YBR111W-A PEX12Q04370 399 aa1.82□□□□□ -2.12
SUS1YBR111W-A ATG17Q06410 417 aa1.82□□□□□ -2.12
SUS1YBR111W-A YPR147CQ06522 304 aaKnown RBP1.82□□□□□ -2.12
SUS1YBR111W-A INO80P53115 1489 aa1.82□□□□□ -2.12
SUS1YBR111W-A SGA1P08019 549 aa1.81□□□□□ -2.12
SUS1YBR111W-A SEC22P22214 214 aa1.81□□□□□ -2.12
SUS1YBR111W-A SCO1P23833 295 aa1.81□□□□□ -2.12
SUS1YBR111W-A JEN1P36035 616 aa1.81□□□□□ -2.12
SUS1YBR111W-A YHL026CP38740 315 aa1.81□□□□□ -2.12
SUS1YBR111W-A BIG1P38813 335 aa1.81□□□□□ -2.12
SUS1YBR111W-A MRPL49P40858 161 aaPredicted RBP1.81□□□□□ -2.12
SUS1YBR111W-A ASI3P53983 676 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms