RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	YJL218W	P40892	196 aa	Known RBP	3	□□□□□ -1.93
CMD1	YBR109C	PFS2	P42841	465 aa	Known RBP	3	□□□□□ -1.93
CMD1	YBR109C	ALB1	P47019	175 aa	Predicted RBP	3	□□□□□ -1.93
CMD1	YBR109C	YJR011C	P47086	261 aa	Predicted RBP	3	□□□□□ -1.93
CMD1	YBR109C	AIM25	P47140	327 aa		3	□□□□□ -1.93
CMD1	YBR109C	TIS11	P47977	285 aa		3	□□□□□ -1.93
CMD1	YBR109C	RPS12	P48589	143 aa	Known RBP	3	□□□□□ -1.93
CMD1	YBR109C	NUP57	P48837	541 aa		3	□□□□□ -1.93
CMD1	YBR109C	UBC12	P52491	188 aa		3	□□□□□ -1.93
CMD1	YBR109C	FLC3	P53121	802 aa		3	□□□□□ -1.93
CMD1	YBR109C	YGL101W	P53144	215 aa		3	□□□□□ -1.93
CMD1	YBR109C	MPC1	P53157	130 aa	Known RBP	3	□□□□□ -1.93
CMD1	YBR109C	MRH4	P53166	561 aa		3	□□□□□ -1.93
CMD1	YBR109C	PCP1	P53259	346 aa		3	□□□□□ -1.93
CMD1	YBR109C	YGR266W	P53326	701 aa		3	□□□□□ -1.93
CMD1	YBR109C	YIF1	P53845	314 aa	Known RBP	3	□□□□□ -1.93
CMD1	YBR109C	PIR1	Q03178	341 aa		3	□□□□□ -1.93
CMD1	YBR109C	PRM15	Q03262	622 aa		3	□□□□□ -1.93
CMD1	YBR109C	YDR387C	Q04162	555 aa		3	□□□□□ -1.93
CMD1	YBR109C	RRN11	Q04712	507 aa		3	□□□□□ -1.93
CMD1	YBR109C	YMR315W	Q04869	349 aa	Known RBP	3	□□□□□ -1.93
CMD1	YBR109C	YMR317W	Q04893	1140 aa		3	□□□□□ -1.93
CMD1	YBR109C	RRG7	Q08774	242 aa	Predicted RBP	3	□□□□□ -1.93
CMD1	YBR109C	AYT1	Q12226	474 aa		3	□□□□□ -1.93
CMD1	YBR109C	SIR2	P06700	562 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	YKR104W	P0CE69	306 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	YOL163W	P0CF20	169 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	RPL20A	P0CX23	172 aa	Known RBP	2.99	□□□□□ -1.93
CMD1	YBR109C	RPL20B	P0CX24	172 aa	Predicted RBP	2.99	□□□□□ -1.93
CMD1	YBR109C	DPM1	P14020	267 aa	Known RBP	2.99	□□□□□ -1.93
CMD1	YBR109C	MCK1	P21965	375 aa	Known RBP	2.99	□□□□□ -1.93
CMD1	YBR109C	MAG1	P22134	296 aa	Known RBP	2.99	□□□□□ -1.93
CMD1	YBR109C	RPI1	P23250	407 aa	Known RBP	2.99	□□□□□ -1.93
CMD1	YBR109C	YCR100C	P25606	316 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	CAM1	P29547	415 aa	Known RBP	2.99	□□□□□ -1.93
CMD1	YBR109C	TAF14	P35189	244 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	PMU1	P36069	295 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	UIP5	P36137	443 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	YCR041W	P37265	110 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	RRF1	P38771	230 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	YHR177W	P38867	453 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	HPA3	P39979	161 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	RFC4	P40339	323 aa	Known RBP	2.99	□□□□□ -1.93
CMD1	YBR109C	LYS12	P40495	371 aa	Known RBP	2.99	□□□□□ -1.93
CMD1	YBR109C	HAM1	P47119	197 aa	Known RBP	2.99	□□□□□ -1.93
CMD1	YBR109C	BAT2	P47176	376 aa	Known RBP	2.99	□□□□□ -1.93
CMD1	YBR109C	AVT4	P50944	713 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	COS1	P53822	381 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	GRX5	Q02784	150 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	PNG1	Q02890	363 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	SCS7	Q03529	384 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	BUR2	Q05949	395 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	DCS1	Q06151	350 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	YLR173W	Q06247	608 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	ZEO1	Q08245	113 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	SYC1	Q08553	188 aa	Predicted RBP	2.99	□□□□□ -1.93
CMD1	YBR109C	FDH1	Q08911	376 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	BTS1	Q12051	335 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	RTC5	Q12108	567 aa	Known RBP	2.99	□□□□□ -1.93
CMD1	YBR109C	TPO4	Q12256	659 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	PST1	Q12355	444 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	FMP16	Q12497	93 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	SET6	Q12529	373 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	YDR524C-B	Q3E6R4	66 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	FSH3	Q99369	266 aa		2.99	□□□□□ -1.93
CMD1	YBR109C	SCEI	P03882	235 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	GRX2	P17695	143 aa	Known RBP	2.98	□□□□□ -1.93
CMD1	YBR109C	ERD2	P18414	219 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	PRE7	P23724	241 aa	Known RBP	2.98	□□□□□ -1.93
CMD1	YBR109C	EXG1	P23776	448 aa	Known RBP	2.98	□□□□□ -1.93
CMD1	YBR109C	RNA14	P25298	677 aa	Known RBP	2.98	□□□□□ -1.93
CMD1	YBR109C	TRX3	P25372	127 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	PUT3	P25502	979 aa	Predicted RBP	2.98	□□□□□ -1.93
CMD1	YBR109C	NAM9	P27929	486 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	FUN26	P31381	517 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	DOA4	P32571	926 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	SOR1	P35497	357 aa	Known RBP	2.98	□□□□□ -1.93
CMD1	YBR109C	ASC1	P38011	319 aa	Known RBP	2.98	□□□□□ -1.93
CMD1	YBR109C	SIF2	P38262	535 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	STP2	P38704	541 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	CHL4	P38907	458 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
CMD1	YBR109C	ALP1	P38971	573 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	GGC1	P38988	300 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	AIM10	P39965	576 aa	Known RBP	2.98	□□□□□ -1.93
CMD1	YBR109C	HEM14	P40012	539 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	SMB1	P40018	196 aa	Known RBP	2.98	□□□□□ -1.93
CMD1	YBR109C	BNA6	P43619	295 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	PHB2	P50085	310 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	PMT5	P52867	743 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	YIP1	P53039	248 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	POP6	P53218	158 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	VOA1	P53262	265 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	DBP6	P53734	629 aa	Known RBP	2.98	□□□□□ -1.93
CMD1	YBR109C	FRE4	P53746	719 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	OCA2	P53949	197 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	CRZ1	P53968	678 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	TPS1	Q00764	495 aa	Known RBP	2.98	□□□□□ -1.93
CMD1	YBR109C	DML1	Q03652	475 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	RNH202	Q05635	350 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms