RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C YER034WP40022 185 aaKnown RBP2.26□□□□□ -2.05
RTG3YBL103C DDI1P40087 428 aa2.26□□□□□ -2.05
RTG3YBL103C GDS1P41913 522 aa2.26□□□□□ -2.05
RTG3YBL103C YFL064CP43540 174 aa2.26□□□□□ -2.05
RTG3YBL103C PIR5P46999 287 aa2.26□□□□□ -2.05
RTG3YBL103C RAD17P48581 401 aa2.26□□□□□ -2.05
RTG3YBL103C NBP1P52919 319 aaPredicted RBP2.26□□□□□ -2.05
RTG3YBL103C SSU72P53538 206 aaPredicted RBP2.26□□□□□ -2.05
RTG3YBL103C ALG9P53868 555 aaKnown RBP2.26□□□□□ -2.05
RTG3YBL103C MRPS17Q03246 237 aaPredicted RBP2.26□□□□□ -2.05
RTG3YBL103C YDR209CQ03480 137 aa2.26□□□□□ -2.05
RTG3YBL103C SNF8Q12483 233 aa2.26□□□□□ -2.05
RTG3YBL103C RPL24BP24000 155 aaKnown RBP2.26□□□□□ -2.05
RTG3YBL103C PBN1P25580 416 aa2.26□□□□□ -2.05
RTG3YBL103C ASF2P32448 525 aaPredicted RBP2.26□□□□□ -2.05
RTG3YBL103C MCH2P36032 473 aa2.26□□□□□ -2.05
RTG3YBL103C YLR446WQ06204 433 aa2.26□□□□□ -2.05
RTG3YBL103C TAZ1Q06510 381 aa2.26□□□□□ -2.05
RTG3YBL103C CTR3Q06686 241 aa2.26□□□□□ -2.05
RTG3YBL103C YPR064WQ12492 139 aa2.26□□□□□ -2.05
RTG3YBL103C THP2O13539 261 aaKnown RBP2.25□□□□□ -2.05
RTG3YBL103C TCP1P12612 559 aaKnown RBP2.25□□□□□ -2.05
RTG3YBL103C TFS1P14306 219 aa2.25□□□□□ -2.05
RTG3YBL103C OSM1P21375 501 aaKnown RBP2.25□□□□□ -2.05
RTG3YBL103C POF1P25576 258 aa2.25□□□□□ -2.05
RTG3YBL103C SPT4P32914 102 aaPredicted RBP2.25□□□□□ -2.05
RTG3YBL103C MIC12P38341 106 aa2.25□□□□□ -2.05
RTG3YBL103C RPL10P41805 221 aaKnown RBP2.25□□□□□ -2.05
RTG3YBL103C PRP24P49960 444 aaKnown RBP2.25□□□□□ -2.05
RTG3YBL103C UBC13P52490 153 aa2.25□□□□□ -2.05
RTG3YBL103C LIF1P53150 421 aa2.25□□□□□ -2.05
RTG3YBL103C PEX31P53203 462 aa2.25□□□□□ -2.05
RTG3YBL103C CDC14Q00684 551 aa2.25□□□□□ -2.05
RTG3YBL103C RPS5P26783 225 aaKnown RBP2.24□□□□□ -2.05
RTG3YBL103C IMP1P28627 190 aa2.24□□□□□ -2.05
RTG3YBL103C VMA6P32366 345 aaKnown RBP2.24□□□□□ -2.05
RTG3YBL103C PRP18P33411 251 aaPredicted RBP2.24□□□□□ -2.05
RTG3YBL103C CBT1P36038 271 aaPredicted RBP2.24□□□□□ -2.05
RTG3YBL103C PRS2P38620 318 aaKnown RBP2.24□□□□□ -2.05
RTG3YBL103C YJR012CP47087 207 aa2.24□□□□□ -2.05
RTG3YBL103C KRE28Q04431 385 aa2.24□□□□□ -2.05
RTG3YBL103C DCR2Q05924 578 aa2.24□□□□□ -2.05
RTG3YBL103C SPO77Q06134 477 aa2.24□□□□□ -2.05
RTG3YBL103C SFH1Q06168 426 aa2.24□□□□□ -2.05
RTG3YBL103C RDS3Q06835 107 aaPredicted RBP2.24□□□□□ -2.05
RTG3YBL103C GET4Q12125 312 aa2.24□□□□□ -2.05
RTG3YBL103C PER33Q12144 273 aa2.24□□□□□ -2.05
RTG3YBL103C HIS3P06633 220 aa2.23□□□□□ -2.05
RTG3YBL103C STE18P18852 110 aa2.23□□□□□ -2.05
RTG3YBL103C RNA15P25299 296 aaPredicted RBP2.23□□□□□ -2.05
RTG3YBL103C RIB1P38066 345 aa2.23□□□□□ -2.05
RTG3YBL103C NPT1P39683 429 aaKnown RBP2.23□□□□□ -2.05
RTG3YBL103C THO1P40040 218 aaKnown RBP2.23□□□□□ -2.05
RTG3YBL103C YRB2P40517 327 aa2.23□□□□□ -2.05
RTG3YBL103C PLB3Q08108 686 aa2.23□□□□□ -2.05
RTG3YBL103C YRA1Q12159 226 aaKnown RBP2.23□□□□□ -2.05
RTG3YBL103C JIP3O13555 125 aa2.22□□□□□ -2.05
RTG3YBL103C CDC33P07260 213 aaKnown RBP2.22□□□□□ -2.05
RTG3YBL103C MATALPHA2P0CY08 210 aa2.22□□□□□ -2.05
RTG3YBL103C HMLALPHA2P0CY09 210 aa2.22□□□□□ -2.05
RTG3YBL103C YPK2P18961 677 aa2.22□□□□□ -2.05
RTG3YBL103C RME1P32338 300 aaKnown RBP2.22□□□□□ -2.05
RTG3YBL103C QRI5P32344 111 aa2.22□□□□□ -2.05
RTG3YBL103C MRPL3P36516 390 aa2.22□□□□□ -2.05
RTG3YBL103C MRX3P38172 270 aa2.22□□□□□ -2.05
RTG3YBL103C SMB1P40018 196 aaKnown RBP2.22□□□□□ -2.05
RTG3YBL103C RFC4P40339 323 aaKnown RBP2.22□□□□□ -2.05
RTG3YBL103C GLG2P47011 380 aa2.22□□□□□ -2.05
RTG3YBL103C MAL13P53338 473 aa2.22□□□□□ -2.05
RTG3YBL103C SNZ1Q03148 297 aa2.22□□□□□ -2.05
RTG3YBL103C EBS1Q03466 884 aaKnown RBP2.22□□□□□ -2.05
RTG3YBL103C NNT1Q05874 261 aa2.22□□□□□ -2.05
RTG3YBL103C RAD9P14737 1309 aa2.22□□□□□ -2.05
RTG3YBL103C RPP0P05317 312 aaKnown RBP2.21□□□□□ -2.06
RTG3YBL103C POX1P13711 748 aa2.21□□□□□ -2.06
RTG3YBL103C CBF1P17106 351 aa2.21□□□□□ -2.06
RTG3YBL103C YMR31P19955 123 aa2.21□□□□□ -2.06
RTG3YBL103C PHO80P20052 293 aa2.21□□□□□ -2.06
RTG3YBL103C VPS21P36017 210 aaKnown RBP2.21□□□□□ -2.06
RTG3YBL103C RTC3P38804 111 aaPredicted RBP2.21□□□□□ -2.06
RTG3YBL103C ERG28P40030 148 aa2.21□□□□□ -2.06
RTG3YBL103C HAM1P47119 197 aaKnown RBP2.21□□□□□ -2.06
RTG3YBL103C HOC1P47124 396 aa2.21□□□□□ -2.06
RTG3YBL103C DSK2P48510 373 aa2.21□□□□□ -2.06
RTG3YBL103C YPT32P51996 222 aaKnown RBP2.21□□□□□ -2.06
RTG3YBL103C RSM27P53305 110 aa2.21□□□□□ -2.06
RTG3YBL103C CUS2P53830 285 aaPredicted RBP2.21□□□□□ -2.06
RTG3YBL103C ASI3P53983 676 aa2.21□□□□□ -2.06
RTG3YBL103C YMR226CQ05016 267 aaKnown RBP2.21□□□□□ -2.06
RTG3YBL103C DPP1Q05521 289 aa2.21□□□□□ -2.06
RTG3YBL103C SEY1Q99287 776 aa2.21□□□□□ -2.06
RTG3YBL103C RPS3P05750 240 aaKnown RBP2.2□□□□□ -2.06
RTG3YBL103C YBR121C-AP0C5L4 52 aa2.2□□□□□ -2.06
RTG3YBL103C ZWF1P11412 505 aaKnown RBP2.2□□□□□ -2.06
RTG3YBL103C RPO26P20435 155 aa2.2□□□□□ -2.06
RTG3YBL103C APA2P22108 325 aa2.2□□□□□ -2.06
RTG3YBL103C IFM1P25038 676 aa2.2□□□□□ -2.06
RTG3YBL103C ARC19P33204 171 aaKnown RBP2.2□□□□□ -2.06
RTG3YBL103C TRM7P38238 310 aaKnown RBP2.2□□□□□ -2.06
RTG3YBL103C SHC1P39000 512 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 100.6 ms