RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 PJA1Q8NG27 643 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 SHDQ96IW2 340 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 FAM20AQ96MK3 541 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 MBOAT7Q96N66 472 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 MTRQ99707 1265 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 GPR62Q9BZJ7 368 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 PRKD2Q9BZL6 878 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 FOXQ1Q9C009 403 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 CSRNP2Q9H175 543 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 OCEL1Q9H607 264 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 CHST7Q9NS84 486 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 WRAP73Q9P2S5 460 aaPredicted RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 ADAM28Q9UKQ2 775 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 VAV3Q9UKW4 847 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 GPR179Q6PRD1 2367 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 DOCK6Q96HP0 2047 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 SPTBN2O15020 2390 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 CCDC194A0A1B0GVG4 234 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 ANHXE9PGG2 379 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 TSPAN1O60635 241 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 EIF5BO60841 1220 aaKnown RBP8.69□□□□□ -1.02
CLK1-215ENST00000621181 KINO60870 393 aaKnown RBP8.69□□□□□ -1.02
CLK1-215ENST00000621181 RPL17P18621 184 aaKnown RBP8.69□□□□□ -1.02
CLK1-215ENST00000621181 CYP4A11Q02928 519 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 TFDP1Q14186 410 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 NCAPH2Q6IBW4 605 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 CPLX2Q6PUV4 134 aaKnown RBP8.69□□□□□ -1.02
CLK1-215ENST00000621181 C4orf19Q8IY42 314 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 DAGLBQ8NCG7 672 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 RABGGTAQ92696 567 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 KCNB2Q92953 911 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 CCDC51Q96ER9 411 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 AIFM3Q96NN9 605 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 NXF3Q9H4D5 531 aaKnown RBP8.69□□□□□ -1.02
CLK1-215ENST00000621181 SLC2A4RGQ9NR83 387 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 DLGAP2Q9P1A6 1054 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 FNIP2Q9P278 1114 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 GIT1Q9Y2X7 761 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 FANCMQ8IYD8 2048 aa8.69□□□□□ -1.02
CLK1-215ENST00000621181 SF3B1O75533 1304 aaKnown RBP eCLIP8.69□□□□□ -1.022e-6■■■■■ 37.1
CLK1-215ENST00000621181 CCNT1O60563 726 aaKnown RBP8.68□□□□□ -1.02
CLK1-215ENST00000621181 TADA2AO75478 443 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 EFEMP2O95967 443 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 C1RP00736 705 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 GLULP15104 373 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 GCFC2P16383 781 aaKnown RBP8.68□□□□□ -1.02
CLK1-215ENST00000621181 ARF4P18085 180 aaPredicted RBP8.68□□□□□ -1.02
CLK1-215ENST00000621181 FSHRP23945 695 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 AKAP5P24588 427 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 EVCP57679 992 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 PTENP60484 403 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 GPC5P78333 572 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 SNW1Q13573 536 aaKnown RBP8.68□□□□□ -1.02
CLK1-215ENST00000621181 CTTNQ14247 550 aaKnown RBP8.68□□□□□ -1.02
CLK1-215ENST00000621181 RABEP1Q15276 862 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 NPY5RQ15761 445 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 LIN9Q5TKA1 542 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 PPP4R3AQ6IN85 833 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 GRASPQ7Z6J2 395 aaPredicted RBP8.68□□□□□ -1.02
CLK1-215ENST00000621181 NEK8Q86SG6 692 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 TPH2Q8IWU9 490 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 DCLK2Q8N568 766 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 CCDC43Q96MW1 224 aaKnown RBP8.68□□□□□ -1.02
CLK1-215ENST00000621181 BCO2Q9BYV7 579 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 ZSWIM4Q9H7M6 989 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 KCNMB3Q9NPA1 279 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 MIOSQ9NXC5 875 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 RGL1Q9NZL6 768 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 POLIQ9UNA4 740 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 ZFP37Q9Y6Q3 630 aaPredicted RBP8.68□□□□□ -1.02
CLK1-215ENST00000621181 MIA3Q5JRA6 1907 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 ZBTB39O15060 712 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 LAMTOR5O43504 91 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 ZMYND10O75800 440 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 PAPLNO95428 1278 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 STARD6P59095 220 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 GRIK3Q13003 919 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 STK3Q13188 491 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 UBXN2BQ14CS0 331 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 EPHA7Q15375 998 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 LILRA6Q6PI73 481 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 PRSS55Q6UWB4 352 aaPredicted RBP8.68□□□□□ -1.02
CLK1-215ENST00000621181 PARM1Q6UWI2 310 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 MTSS1LQ765P7 747 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 CEP57Q86XR8 500 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 GPR65Q8IYL9 337 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 FAM177A1Q8N128 213 aaPredicted RBP8.68□□□□□ -1.02
CLK1-215ENST00000621181 HASPINQ8TF76 798 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 FGF14Q92915 247 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 DYDC2Q96IM9 177 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 RPP25Q9BUL9 199 aaKnown RBP8.68□□□□□ -1.02
CLK1-215ENST00000621181 SPATA6Q9NWH7 488 aaPredicted RBP8.68□□□□□ -1.02
CLK1-215ENST00000621181 KLK14Q9P0G3 267 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 CACNG4Q9UBN1 327 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 PARP2Q9UGN5 583 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 CDH7Q9ULB5 785 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 KCNJ14Q9UNX9 436 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 MYH15Q9Y2K3 1946 aa8.68□□□□□ -1.02
CLK1-215ENST00000621181 KANSL1LA0AUZ9 987 aa8.67□□□□□ -1.02
CLK1-215ENST00000621181 POTEMA6NI47 508 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms