RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 FAM187BQ17R55 369 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 USP41Q3LFD5 358 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 CDCA2Q69YH5 1023 aaPredicted RBP12.34□□□□□ -0.43
TARDBP-221ENST00000619555 PADI6Q6TGC4 694 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 GLYCTKQ8IVS8 523 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 ZBTB8OSQ8IWT0 167 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 RIN2Q8WYP3 895 aaPredicted RBP12.34□□□□□ -0.43
TARDBP-221ENST00000619555 ATOH1Q92858 354 aaPredicted RBP12.34□□□□□ -0.43
TARDBP-221ENST00000619555 ZNF707Q96C28 371 aaPredicted RBP12.34□□□□□ -0.43
TARDBP-221ENST00000619555 PRIMPOLQ96LW4 560 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 LLPHQ9BRT6 129 aaKnown RBP12.34□□□□□ -0.43
TARDBP-221ENST00000619555 PDZD7Q9H5P4 517 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 KCNK12Q9HB15 430 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 SNTG2Q9NY99 539 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 ADAM28Q9UKQ2 775 aa12.34□□□□□ -0.43
TARDBP-221ENST00000619555 MYO15AQ9UKN7 3530 aa12.33□□□□□ -0.43
TARDBP-221ENST00000619555 TRIP11Q15643 1979 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 ARHGEF35A5YM69 484 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 CASTOR2A6NHX0 329 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 TGM5O43548 720 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
TARDBP-221ENST00000619555 PRKCBP05771 671 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 PRPF4BQ13523 1007 aaKnown RBP12.33□□□□□ -0.44
TARDBP-221ENST00000619555 TDGQ13569 410 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 NBR1Q14596 966 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 TMEM132AQ24JP5 1023 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 TTC38Q5R3I4 469 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 EEF1DP3Q658K8 133 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 ASTLQ6HA08 431 aaPredicted RBP12.33□□□□□ -0.44
TARDBP-221ENST00000619555 PRSS55Q6UWB4 352 aaPredicted RBP12.33□□□□□ -0.44
TARDBP-221ENST00000619555 NOSTRINQ8IVI9 506 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 ERMNQ8TAM6 284 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 HASPINQ8TF76 798 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 RSAD2Q8WXG1 361 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 SMG7Q92540 1137 aaKnown RBP12.33□□□□□ -0.44
TARDBP-221ENST00000619555 MYADMQ96S97 322 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 KIFC3Q9BVG8 833 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 C2orf40Q9H1Z8 148 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 FOXP1Q9H334 677 aaPredicted RBP12.33□□□□□ -0.44
TARDBP-221ENST00000619555 MFSD1Q9H3U5 465 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 WDR6Q9NNW5 1121 aaKnown RBP12.33□□□□□ -0.44
TARDBP-221ENST00000619555 SPTBN4Q9H254 2564 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 DMDP11532 3685 aa12.33□□□□□ -0.44
TARDBP-221ENST00000619555 ZMYM2Q9UBW7 1377 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 ACKR2O00590 384 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 PTGESO14684 152 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 N4BP3O15049 544 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 NARSO43776 548 aaKnown RBP12.32□□□□□ -0.44
TARDBP-221ENST00000619555 GBP2P32456 591 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-221ENST00000619555 NUBP1P53384 320 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 TUSC3Q13454 348 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 HSP90AA2PQ14568 343 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-221ENST00000619555 MAPK6Q16659 721 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 RTP2Q5QGT7 225 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 LILRA6Q6PI73 481 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 ELMSAN1Q6PJG2 1045 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 C4orf32Q8N8J7 132 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 FLCNQ8NFG4 579 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 FBXO18Q8NFZ0 1043 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 DEPTORQ8TB45 409 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 HDAC7Q8WUI4 952 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 RHOBTB2Q9BYZ6 727 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 CCDC113Q9H0I3 377 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 NT5C3AQ9H0P0 336 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 PLEKHA4Q9H4M7 779 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.32□□□□□ -0.44
TARDBP-221ENST00000619555 FNIP2Q9P278 1114 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 DPP7Q9UHL4 492 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 CLUHO75153 1309 aa12.32□□□□□ -0.44
TARDBP-221ENST00000619555 PI15O43692 258 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 RECQL4O94761 1208 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 KIF4AO95239 1232 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 NPR3P17342 541 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 IGFBP6P24592 240 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-221ENST00000619555 CCT6AP40227 531 aaKnown RBP12.31□□□□□ -0.44
TARDBP-221ENST00000619555 NAMPTP43490 491 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 MCM2P49736 904 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 CLCN5P51795 746 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 ORC2Q13416 577 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-221ENST00000619555 NAB2Q15742 525 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 NT5DC1Q5TFE4 455 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 FAM171A1Q5VUB5 890 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 CWF19L1Q69YN2 538 aaKnown RBP12.31□□□□□ -0.44
TARDBP-221ENST00000619555 CYP26C1Q6V0L0 522 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 GPR65Q8IYL9 337 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 FAM184AQ8NB25 1140 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 STAMQ92783 540 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 PRKD2Q9BZL6 878 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 IRF2BPLQ9H1B7 796 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 BHMT2Q9H2M3 363 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 PIDD1Q9HB75 910 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 IGSF9Q9P2J2 1179 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 DUSP12Q9UNI6 340 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 GDAQ9Y2T3 454 aa12.31□□□□□ -0.44
TARDBP-221ENST00000619555 SF3B1O75533 1304 aaKnown RBP eCLIP12.31□□□□□ -0.44
TARDBP-221ENST00000619555 GFRA3O60609 400 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 PAPLNO95428 1278 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 C1RP00736 705 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 THP07101 528 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 FXR2P51116 673 aaKnown RBP eCLIP12.3□□□□□ -0.442e-7■■□□□ 11.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms