RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 GIT2Q14161 759 aa24.52■■□□□ 1.52
GTF2F1-204ENST00000594965 CEP120Q8N960 986 aa24.52■■□□□ 1.52
GTF2F1-204ENST00000594965 RASSF8Q8NHQ8 419 aa24.52■■□□□ 1.52
GTF2F1-204ENST00000594965 LARP4BQ92615 738 aaKnown RBP24.52■■□□□ 1.52
GTF2F1-204ENST00000594965 CDT1Q9H211 546 aa24.52■■□□□ 1.52
GTF2F1-204ENST00000594965 DAXXQ9UER7 740 aaPredicted RBP24.52■■□□□ 1.52
GTF2F1-204ENST00000594965 KCNG1Q9UIX4 513 aa24.52■■□□□ 1.52
GTF2F1-204ENST00000594965 FAM50BQ9Y247 325 aa24.52■■□□□ 1.52
GTF2F1-204ENST00000594965 HCFC2Q9Y5Z7 792 aa24.52■■□□□ 1.52
GTF2F1-204ENST00000594965 SOD2P04179 222 aa24.51■■□□□ 1.51
GTF2F1-204ENST00000594965 CA8P35219 290 aa24.51■■□□□ 1.51
GTF2F1-204ENST00000594965 DDIT3P35638 169 aa24.51■■□□□ 1.51
GTF2F1-204ENST00000594965 ZNF131P52739 623 aa24.51■■□□□ 1.51
GTF2F1-204ENST00000594965 NCKAP1LP55160 1127 aa24.51■■□□□ 1.51
GTF2F1-204ENST00000594965 BMS1Q14692 1282 aaKnown RBP24.51■■□□□ 1.51
GTF2F1-204ENST00000594965 ANKRD54Q6NXT1 300 aa24.51■■□□□ 1.51
GTF2F1-204ENST00000594965 SYCE2Q6PIF2 218 aa24.51■■□□□ 1.51
GTF2F1-204ENST00000594965 RABGGTAQ92696 567 aa24.51■■□□□ 1.51
GTF2F1-204ENST00000594965 KHSRPQ92945 711 aaKnown RBP eCLIP24.51■■□□□ 1.51
GTF2F1-204ENST00000594965 ZBTB45Q96K62 511 aaPredicted RBP24.51■■□□□ 1.51
GTF2F1-204ENST00000594965 PAAF1Q9BRP4 392 aa24.51■■□□□ 1.51
GTF2F1-204ENST00000594965 HERC2P3Q9BVR0 1158 aa24.51■■□□□ 1.51
GTF2F1-204ENST00000594965 SMTNP53814 917 aa24.5■■□□□ 1.51
GTF2F1-204ENST00000594965 ZP2Q05996 745 aa24.5■■□□□ 1.51
GTF2F1-204ENST00000594965 TUSC3Q13454 348 aa24.5■■□□□ 1.51
GTF2F1-204ENST00000594965 ZNF568Q3ZCX4 644 aa24.5■■□□□ 1.51
GTF2F1-204ENST00000594965 LINC00301Q8NCQ3 95 aa24.5■■□□□ 1.51
GTF2F1-204ENST00000594965 KCNN1Q92952 543 aa24.5■■□□□ 1.51
GTF2F1-204ENST00000594965 COLEC11Q9BWP8 271 aa24.5■■□□□ 1.51
GTF2F1-204ENST00000594965 S1PR5Q9H228 398 aa24.5■■□□□ 1.51
GTF2F1-204ENST00000594965 LARSQ9P2J5 1176 aaKnown RBP24.5■■□□□ 1.51
GTF2F1-204ENST00000594965 STK39Q9UEW8 545 aa24.5■■□□□ 1.51
GTF2F1-204ENST00000594965 PRKAG3Q9UGI9 489 aa24.5■■□□□ 1.51
GTF2F1-204ENST00000594965 VWA8A3KMH1 1905 aa24.5■■□□□ 1.51
GTF2F1-204ENST00000594965 C19orf67A6NJJ6 358 aa24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 BRD1O95696 1058 aa24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 THP07101 528 aa24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 GRM5P41594 1212 aa24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 FOXD4L5Q5VV16 416 aaPredicted RBP24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 ZBTB33Q86T24 672 aa24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 ADHFE1Q8IWW8 467 aa24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 GJD3Q8N144 294 aa24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 KRI1Q8N9T8 703 aaKnown RBP24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 SPRYD3Q8NCJ5 442 aa24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 SLC22A17Q8WUG5 538 aa24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 FOXD4L4Q8WXT5 416 aaPredicted RBP24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 GPR62Q9BZJ7 368 aa24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 TFIP11Q9UBB9 837 aaKnown RBP24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 CCDC39Q9UFE4 941 aa24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 USP15Q9Y4E8 981 aaPredicted RBP24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 MTCL1Q9Y4B5 1905 aaKnown RBP24.49■■□□□ 1.51
GTF2F1-204ENST00000594965 C5orf42Q9H799 3197 aa24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 CASTOR2A6NHX0 329 aa24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 NR1I2O75469 434 aa24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 HSP90AA1P07900 732 aaKnown RBP24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 ZSCAN22P10073 491 aaPredicted RBP24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 PKP1Q13835 747 aa24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 KIAA0319Q5VV43 1072 aa24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 MPZL3Q6UWV2 235 aa24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 ALKAL1Q6UXT8 129 aa24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 HAUS6Q7Z4H7 955 aa24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 APBB1IPQ7Z5R6 666 aaPredicted RBP24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 SUSD6Q92537 303 aa24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 CASP10Q92851 521 aa24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 KLHL5Q96PQ7 755 aa24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 FIZ1Q96SL8 496 aa24.48■■□□□ 1.51
GTF2F1-204ENST00000594965 A0A087X0B3 334 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 MEFVO15553 781 aaPredicted RBP24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 FAM13AO94988 1023 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 F13A1P00488 732 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 CNPP09543 421 aaKnown RBP24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 SRGAP2BP0DMP2 458 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 MCF2P10911 925 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 OSTNP61366 133 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 STRN3Q13033 797 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 HSP90AA2PQ14568 343 aaPredicted RBP24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 STK38Q15208 465 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 XKR4Q5GH76 650 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 GLRA4Q5JXX5 417 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 FUT10Q6P4F1 479 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 MYCT1Q8N699 235 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 ZNF396Q96N95 335 aaPredicted RBP24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 PPP1R10Q96QC0 940 aaKnown RBP24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 APOL5Q9BWW9 433 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 HAPLN2Q9GZV7 340 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 PARVGQ9HBI0 331 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 CHST7Q9NS84 486 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 STK17AQ9UEE5 414 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 ADAM28Q9UKQ2 775 aa24.47■■□□□ 1.51
GTF2F1-204ENST00000594965 TOM1L1O75674 476 aa24.46■■□□□ 1.51
GTF2F1-204ENST00000594965 KRT18P05783 430 aaKnown RBP24.46■■□□□ 1.51
GTF2F1-204ENST00000594965 EPCAMP16422 314 aa24.46■■□□□ 1.51
GTF2F1-204ENST00000594965 RRAGBQ5VZM2 374 aa24.46■■□□□ 1.51
GTF2F1-204ENST00000594965 ZPBP2Q6X784 338 aa24.46■■□□□ 1.51
GTF2F1-204ENST00000594965 B3GALT6Q96L58 329 aa24.46■■□□□ 1.51
GTF2F1-204ENST00000594965 TCHPQ9BT92 498 aa24.46■■□□□ 1.51
GTF2F1-204ENST00000594965 MRPL17Q9NRX2 175 aaKnown RBP24.46■■□□□ 1.51
GTF2F1-204ENST00000594965 C2orf16Q68DN1 1984 aa24.45■■□□□ 1.51
GTF2F1-204ENST00000594965 BDP1A6H8Y1 2624 aa24.45■■□□□ 1.5
GTF2F1-204ENST00000594965 H0YCG3 227 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms