RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 KAT2BQ92831 832 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 EMID1Q96A84 441 aaPredicted RBP10.23□□□□□ -0.77
VPS25-205ENST00000590339 IFT74Q96LB3 600 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 WDR24Q96S15 920 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 WNT8AQ9H1J5 351 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 HAUS4Q9H6D7 363 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 IL23AQ9NPF7 189 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 AIPL1Q9NZN9 384 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 GCNT4Q9P109 453 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 MYO1AQ9UBC5 1043 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 HDAC6Q9UBN7 1215 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 DNAI1Q9UI46 699 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 KCNG1Q9UIX4 513 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 AJAP1Q9UKB5 411 aaPredicted RBP10.23□□□□□ -0.77
VPS25-205ENST00000590339 USP20Q9Y2K6 914 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 FHOD1Q9Y613 1164 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 ATP8B3O60423 1300 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 IGKV6-21A0A0C4DH24 114 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 CCDC169A6NNP5 214 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 ZBBXA8MT70 800 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 DYNC1I1O14576 645 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 GAS2O43903 313 aaKnown RBP10.22□□□□□ -0.77
VPS25-205ENST00000590339 SERPING1P05155 500 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 TRIM49P0CI25 452 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 TRIM49CP0CI26 452 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 ACTN1P12814 892 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 GARTP22102 1010 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 EIF4A3P38919 411 aaKnown RBP10.22□□□□□ -0.77
VPS25-205ENST00000590339 PRKCIP41743 596 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 PSEN2P49810 448 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 SLC26A2P50443 739 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 KIF11P52732 1056 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 VAV2P52735 878 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 GNG11P61952 73 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 ZNF200P98182 395 aaPredicted RBP10.22□□□□□ -0.77
VPS25-205ENST00000590339 MFSD10Q14728 455 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 PLCB4Q15147 1175 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 KIAA0753Q2KHM9 967 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 CBWD6Q4V339 395 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 ARHGAP29Q52LW3 1261 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 CBWD3Q5JTY5 395 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 CBWD5Q5RIA9 395 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 SFMBT2Q5VUG0 894 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 GDF6Q6KF10 455 aaPredicted RBP10.22□□□□□ -0.77
VPS25-205ENST00000590339 PSRC1Q6PGN9 363 aaPredicted RBP10.22□□□□□ -0.77
VPS25-205ENST00000590339 RPUSD2Q8IZ73 545 aaKnown RBP10.22□□□□□ -0.77
VPS25-205ENST00000590339 ZSWIM2Q8NEG5 633 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 PPTC7Q8NI37 304 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 LMO3Q8TAP4 145 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 ZNF592Q92610 1267 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 NLRC4Q9NPP4 1024 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 NRBP2Q9NSY0 501 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 CXXC1Q9P0U4 656 aaPredicted RBP10.22□□□□□ -0.77
VPS25-205ENST00000590339 STYXL1Q9Y6J8 313 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 DNAH12Q6ZR08 3092 aa10.22□□□□□ -0.77
VPS25-205ENST00000590339 RCCD1A6NED2 376 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 NOP56O00567 594 aaKnown RBP10.21□□□□□ -0.77
VPS25-205ENST00000590339 PJA2O43164 708 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 KIF5CO60282 957 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 PPFIA4O75335 1185 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 ABL1P00519 1130 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 IQCF3P0C7M6 154 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 HOXD8P13378 290 aaPredicted RBP10.21□□□□□ -0.77
VPS25-205ENST00000590339 KRT13P13646 458 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 RFX1P22670 979 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 ANXA13P27216 316 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 PBX2P40425 430 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 VAMP7P51809 220 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 PTPN11Q06124 597 aaPredicted RBP10.21□□□□□ -0.77
VPS25-205ENST00000590339 CAPSQ13938 189 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 ASIC2Q16515 512 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 EPC2Q52LR7 807 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 CDCA2Q69YH5 1023 aaPredicted RBP10.21□□□□□ -0.77
VPS25-205ENST00000590339 IQCEQ6IPM2 695 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 TRMT1LQ7Z2T5 733 aaKnown RBP10.21□□□□□ -0.77
VPS25-205ENST00000590339 TRIM50Q86XT4 487 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 OLIG1Q8TAK6 271 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 TMC2Q8TDI7 906 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 SLC7A3Q8WY07 619 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 TMEM143Q96AN5 459 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 MFSD14AQ96MC6 490 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 GUCD1Q96NT3 240 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 CDX2Q99626 313 aaPredicted RBP10.21□□□□□ -0.77
VPS25-205ENST00000590339 INTS2Q9H0H0 1204 aaKnown RBP10.21□□□□□ -0.77
VPS25-205ENST00000590339 TTYH1Q9H313 450 aaPredicted RBP10.21□□□□□ -0.77
VPS25-205ENST00000590339 PCIF1Q9H4Z3 704 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 AZI2Q9H6S1 392 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 TMEM134Q9H6X4 195 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 LZTFL1Q9NQ48 299 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 NENFQ9UMX5 172 aa10.21□□□□□ -0.77
VPS25-205ENST00000590339 KIAA0391O15091 583 aaKnown RBP10.2□□□□□ -0.78
VPS25-205ENST00000590339 DNAJB2P25686 324 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 CASQ1P31415 396 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 DLG4P78352 724 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 PPP3CAQ08209 521 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 MKRN4PQ13434 485 aaPredicted RBP10.2□□□□□ -0.78
VPS25-205ENST00000590339 BFSP2Q13515 415 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 RAPGEF1Q13905 1077 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 SNRNP35Q16560 246 aaKnown RBP10.2□□□□□ -0.78
VPS25-205ENST00000590339 IER5Q5VY09 327 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms