RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 C17orf80Q9BSJ5 609 aa6.41□□□□□ -1.38
DNMT1-220ENST00000589351 LMAN2LQ9H0V9 348 aa6.41□□□□□ -1.38
DNMT1-220ENST00000589351 CPVLQ9H3G5 476 aa6.41□□□□□ -1.38
DNMT1-220ENST00000589351 NSUN3Q9H649 340 aaKnown RBP6.41□□□□□ -1.38
DNMT1-220ENST00000589351 JMJD4Q9H9V9 463 aa6.41□□□□□ -1.38
DNMT1-220ENST00000589351 DIAPH3Q9NSV4 1193 aa6.41□□□□□ -1.38
DNMT1-220ENST00000589351 ZSWIM5Q9P217 1185 aa6.41□□□□□ -1.38
DNMT1-220ENST00000589351 COL20A1Q9P218 1284 aa6.41□□□□□ -1.38
DNMT1-220ENST00000589351 VAV3Q9UKW4 847 aa6.41□□□□□ -1.38
DNMT1-220ENST00000589351 ZNF215Q9UL58 517 aaPredicted RBP6.41□□□□□ -1.38
DNMT1-220ENST00000589351 PCDHA1Q9Y5I3 950 aa6.41□□□□□ -1.38
DNMT1-220ENST00000589351 U3KQE9 123 aa6.41□□□□□ -1.38
DNMT1-220ENST00000589351 NCOR1O75376 2440 aa6.41□□□□□ -1.38
DNMT1-220ENST00000589351 NCANO14594 1321 aa6.41□□□□□ -1.38
DNMT1-220ENST00000589351 CHD7Q9P2D1 2997 aa6.41□□□□□ -1.38
DNMT1-220ENST00000589351 KIAA1217Q5T5P2 1943 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 TET1Q8NFU7 2136 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 B4E1Z4 1266 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 KLRF2D3W0D1 207 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 ZBTB5O15062 677 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 PHACTR2O75167 634 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 TNFRSF21O75509 655 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 CYP11A1P05108 521 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 RPLP2P05387 115 aaKnown RBP6.4□□□□□ -1.38
DNMT1-220ENST00000589351 ZNF286BP0CG31 522 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 IL9P15248 144 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 SDSP20132 328 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 ERCC5P28715 1186 aaPredicted RBP6.4□□□□□ -1.38
DNMT1-220ENST00000589351 RAP1GAPP47736 663 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 HSD17B4P51659 736 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 PRKCQQ04759 706 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 PCDH1Q08174 1060 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 AAMPQ13685 434 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 PGM5Q15124 567 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 TRIM71Q2Q1W2 868 aaKnown RBP6.4□□□□□ -1.38
DNMT1-220ENST00000589351 HSDL1Q3SXM5 330 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 NEK9Q8TD19 979 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 CUL5Q93034 780 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 IL17RAQ96F46 866 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 CTAGE1Q96RT6 745 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 PRRX2Q99811 253 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 PDCD2LQ9BRP1 358 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 C11orf84Q9BUA3 381 aaPredicted RBP6.4□□□□□ -1.38
DNMT1-220ENST00000589351 IFIH1Q9BYX4 1025 aaKnown RBP6.4□□□□□ -1.38
DNMT1-220ENST00000589351 RNPEPQ9H4A4 650 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 CD320Q9NPF0 282 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 CLDND1Q9NY35 253 aa6.4□□□□□ -1.38
DNMT1-220ENST00000589351 SALL3Q9BXA9 1300 aa6.4□□□□□ -1.39
DNMT1-220ENST00000589351 TRANK1O15050 2925 aa6.4□□□□□ -1.39
DNMT1-220ENST00000589351 MYH7BA7E2Y1 1941 aa6.4□□□□□ -1.39
DNMT1-220ENST00000589351 SIP14410 1827 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 BDP1A6H8Y1 2624 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 ZNF503-AS2A6NEH8 195 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 H3BQ06 376 aaPredicted RBP6.39□□□□□ -1.39
DNMT1-220ENST00000589351 SMIM10L2AP0DMW4 78 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 SMIM10L2BP0DMW5 78 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 MZF1P28698 734 aaPredicted RBP6.39□□□□□ -1.39
DNMT1-220ENST00000589351 CTNNB1P35222 781 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 SERPINB4P48594 390 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 ZNF200P98182 395 aaPredicted RBP6.39□□□□□ -1.39
DNMT1-220ENST00000589351 GHRHRQ02643 423 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 RAD51AP2Q09MP3 1159 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 CDK5R2Q13319 367 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 SART3Q15020 963 aaKnown RBP6.39□□□□□ -1.39
DNMT1-220ENST00000589351 MLANAQ16655 118 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 TCEAL5Q5H9L2 206 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 CWC27Q6UX04 472 aaKnown RBP6.39□□□□□ -1.39
DNMT1-220ENST00000589351 ZNF589Q86UQ0 364 aaPredicted RBP6.39□□□□□ -1.39
DNMT1-220ENST00000589351 NLRX1Q86UT6 975 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 TBC1D10CQ8IV04 446 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 ADHFE1Q8IWW8 467 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 ENAHQ8N8S7 591 aaPredicted RBP6.39□□□□□ -1.39
DNMT1-220ENST00000589351 C16orf70Q9BSU1 422 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 DSCC1Q9BVC3 393 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 KRTAP9-3Q9BYQ3 159 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 RWDD1Q9H446 243 aaPredicted RBP6.39□□□□□ -1.39
DNMT1-220ENST00000589351 FOXD3Q9UJU5 478 aaPredicted RBP6.39□□□□□ -1.39
DNMT1-220ENST00000589351 NEDD4P46934 1319 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 NRCAMQ92823 1304 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 XIRP2A4UGR9 3374 aa6.39□□□□□ -1.39
DNMT1-220ENST00000589351 MYH6P13533 1939 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 REV3LO60673 3130 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 PNMA6FA0A0J9YX94 578 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 B8ZZF3 427 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 C5orf67F2Z3F1 127 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 TREHO43280 583 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 FIBPO43427 364 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 SORBS3O60504 671 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 LGALS2P05162 132 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 CTSHP09668 335 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 FAM87AP0C7U9 286 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 UBA1P22314 1058 aaKnown RBP6.38□□□□□ -1.39
DNMT1-220ENST00000589351 HOXA13P31271 388 aaPredicted RBP6.38□□□□□ -1.39
DNMT1-220ENST00000589351 ICAM3P32942 547 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 BMPR1AP36894 532 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 MRE11P49959 708 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 ARHGAP4P98171 946 aa6.38□□□□□ -1.39
DNMT1-220ENST00000589351 HDAC1Q13547 482 aaPredicted RBP6.38□□□□□ -1.39
DNMT1-220ENST00000589351 BTG3Q14201 252 aaPredicted RBP6.38□□□□□ -1.39
DNMT1-220ENST00000589351 TSNAXIP1Q2TAA8 658 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms