RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 FNBP1Q96RU3 617 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 CGRRF1Q99675 332 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 DESI2Q9BSY9 194 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 GCOM2Q9BZD3 368 aaPredicted RBP12.37□□□□□ -0.43
SMAD4-205ENST00000588745 CDT1Q9H211 546 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 PDZD7Q9H5P4 517 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 TRMT1Q9NXH9 659 aaKnown RBP12.37□□□□□ -0.43
SMAD4-205ENST00000588745 GTF2IRD1Q9UHL9 959 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 AJAP1Q9UKB5 411 aaPredicted RBP12.37□□□□□ -0.43
SMAD4-205ENST00000588745 PPP2R2CQ9Y2T4 447 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 COQ4Q9Y3A0 265 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 CSDE1O75534 798 aaKnown RBP12.36□□□□□ -0.43
SMAD4-205ENST00000588745 NDUFA10O95299 355 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 ASGR1P07306 291 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 CCDC175P0C221 793 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 MCF2P10911 925 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 ARF4P18085 180 aaPredicted RBP12.36□□□□□ -0.43
SMAD4-205ENST00000588745 CYLC1P35663 651 aaPredicted RBP12.36□□□□□ -0.43
SMAD4-205ENST00000588745 TNFSF9P41273 254 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 WNT7BP56706 349 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 JAM2P57087 298 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 ZNF200P98182 395 aaPredicted RBP12.36□□□□□ -0.43
SMAD4-205ENST00000588745 TMEM62Q0P6H9 643 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 NBPF20Q3BBV1 942 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 SEZ6Q53EL9 994 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 CCSAPQ6IQ19 270 aaPredicted RBP12.36□□□□□ -0.43
SMAD4-205ENST00000588745 TAF2Q6P1X5 1199 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 GJB7Q6PEY0 223 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 CCDC170Q8IYT3 715 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 PCSK9Q8NBP7 692 aaKnown RBP12.36□□□□□ -0.43
SMAD4-205ENST00000588745 DNAJB3Q8WWF6 145 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 POP1Q99575 1024 aaKnown RBP12.36□□□□□ -0.43
SMAD4-205ENST00000588745 PDE11AQ9HCR9 933 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 ARHGAP20Q9P2F6 1191 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 CPSF3Q9UKF6 684 aaKnown RBP12.36□□□□□ -0.43
SMAD4-205ENST00000588745 ADGRG1Q9Y653 693 aa12.36□□□□□ -0.43
SMAD4-205ENST00000588745 TRIP12Q14669 1992 aaPredicted RBP12.36□□□□□ -0.43
SMAD4-205ENST00000588745 GOLGA6L9A6NEM1 432 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 DARSP14868 501 aaKnown RBP12.35□□□□□ -0.43
SMAD4-205ENST00000588745 TNNI1P19237 187 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 GRK4P32298 578 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 PCBP1Q15365 356 aaKnown RBP eCLIP12.35□□□□□ -0.43
SMAD4-205ENST00000588745 SURF1Q15526 300 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 KCNA10Q16322 511 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 ASIC2Q16515 512 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 SLC9C1Q4G0N8 1177 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 HGSNATQ68CP4 663 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 LMBRD2Q68DH5 695 aaPredicted RBP12.35□□□□□ -0.43
SMAD4-205ENST00000588745 C15orf39Q6ZRI6 1047 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 SV2AQ7L0J3 742 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 RNF180Q86T96 592 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 SESTD1Q86VW0 696 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 CDR2LQ86X02 465 aaPredicted RBP12.35□□□□□ -0.43
SMAD4-205ENST00000588745 ZNF710Q8N1W2 664 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 NME8Q8N427 588 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 ACRBPQ8NEB7 543 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 FBXL13Q8NEE6 735 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 TAS1R2Q8TE23 839 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 CPB2Q96IY4 423 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 C16orf45Q96MC5 204 aaPredicted RBP12.35□□□□□ -0.43
SMAD4-205ENST00000588745 OSMRQ99650 979 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 NHEJ1Q9H9Q4 299 aaPredicted RBP12.35□□□□□ -0.43
SMAD4-205ENST00000588745 AIPL1Q9NZN9 384 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 DNAJC12Q9UKB3 198 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 EPN1Q9Y6I3 576 aaPredicted RBP12.35□□□□□ -0.43
SMAD4-205ENST00000588745 PTPRJQ12913 1337 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 ANK1P16157 1881 aa12.35□□□□□ -0.43
SMAD4-205ENST00000588745 SSU72P8A0A1W2PR75 194 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 EIF3CLB5ME19 914 aaKnown RBP12.34□□□□□ -0.43
SMAD4-205ENST00000588745 F8VZ95 297 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 TULP1O00294 542 aaPredicted RBP12.34□□□□□ -0.43
SMAD4-205ENST00000588745 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
SMAD4-205ENST00000588745 SERPING1P05155 500 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 PLEKP08567 350 aaPredicted RBP12.34□□□□□ -0.43
SMAD4-205ENST00000588745 AP3M2P53677 418 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 MAPK8IP2Q13387 824 aaPredicted RBP12.34□□□□□ -0.43
SMAD4-205ENST00000588745 KYAT1Q16773 422 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 ZACNQ401N2 412 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 TDRD12Q587J7 1177 aaKnown RBP12.34□□□□□ -0.43
SMAD4-205ENST00000588745 FAM47CQ5HY64 1035 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 PHLDB3Q6NSJ2 640 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 NYAP1Q6ZVC0 841 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 CATSPER4Q7RTX7 472 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 GPIHBP1Q8IV16 184 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 WDR49Q8IV35 697 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 ARHGEF19Q8IW93 802 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 REXO1L1PQ8IX06 675 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 THNSL1Q8IYQ7 743 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 CEP120Q8N960 986 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 ZNF516Q92618 1163 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 SEMA4DQ92854 862 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 VTI1AQ96AJ9 217 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 CCDC42Q96M95 316 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 EIF3CQ99613 913 aaKnown RBP12.34□□□□□ -0.43
SMAD4-205ENST00000588745 STK33Q9BYT3 514 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 RAB20Q9NX57 234 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 TSKSQ9UJT2 592 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 GINS2Q9Y248 185 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 TRIM17Q9Y577 477 aa12.34□□□□□ -0.43
SMAD4-205ENST00000588745 PTCH2Q9Y6C5 1203 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms