RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 MIOSQ9NXC5 875 aa23.46■■□□□ 1.35
RETREG3-204ENST00000586796 ZC3H11AO75152 810 aaKnown RBP eCLIP23.45■■□□□ 1.34
RETREG3-204ENST00000586796 YARSP54577 528 aaKnown RBP23.45■■□□□ 1.34
RETREG3-204ENST00000586796 EHHADHQ08426 723 aa23.45■■□□□ 1.34
RETREG3-204ENST00000586796 CLEC17AQ6ZS10 378 aa23.45■■□□□ 1.34
RETREG3-204ENST00000586796 ZNF280BQ86YH2 543 aa23.45■■□□□ 1.34
RETREG3-204ENST00000586796 NELFCDQ8IXH7 590 aa23.45■■□□□ 1.34
RETREG3-204ENST00000586796 COLGALT1Q8NBJ5 622 aa23.45■■□□□ 1.34
RETREG3-204ENST00000586796 CCDC47Q96A33 483 aaKnown RBP23.45■■□□□ 1.34
RETREG3-204ENST00000586796 ACAP3Q96P50 834 aa23.45■■□□□ 1.34
RETREG3-204ENST00000586796 MSTO1Q9BUK6 570 aa23.45■■□□□ 1.34
RETREG3-204ENST00000586796 CXCL16Q9H2A7 254 aa23.45■■□□□ 1.34
RETREG3-204ENST00000586796 NRDE2Q9H7Z3 1164 aa23.45■■□□□ 1.34
RETREG3-204ENST00000586796 KANSL3Q9P2N6 904 aa23.45■■□□□ 1.34
RETREG3-204ENST00000586796 PCDHB12Q9Y5F1 795 aa23.45■■□□□ 1.34
RETREG3-204ENST00000586796 DDHD2O94830 711 aa23.44■■□□□ 1.34
RETREG3-204ENST00000586796 LAG3P18627 525 aa23.44■■□□□ 1.34
RETREG3-204ENST00000586796 IGFBP4P22692 258 aa23.44■■□□□ 1.34
RETREG3-204ENST00000586796 GPM6BQ13491 265 aa23.44■■□□□ 1.34
RETREG3-204ENST00000586796 ERCC4Q92889 916 aaPredicted RBP23.44■■□□□ 1.34
RETREG3-204ENST00000586796 TIGD1Q96MW7 591 aa23.44■■□□□ 1.34
RETREG3-204ENST00000586796 GAS2L1Q99501 681 aaPredicted RBP23.44■■□□□ 1.34
RETREG3-204ENST00000586796 TMEM206Q9H813 350 aa23.44■■□□□ 1.34
RETREG3-204ENST00000586796 TULP1O00294 542 aaPredicted RBP23.43■■□□□ 1.34
RETREG3-204ENST00000586796 CSPG5O95196 566 aa23.43■■□□□ 1.34
RETREG3-204ENST00000586796 BCAR1P56945 870 aa23.43■■□□□ 1.34
RETREG3-204ENST00000586796 STK4Q13043 487 aa23.43■■□□□ 1.34
RETREG3-204ENST00000586796 SLFN12LQ6IEE8 588 aa23.43■■□□□ 1.34
RETREG3-204ENST00000586796 KCNT2Q6UVM3 1135 aa23.43■■□□□ 1.34
RETREG3-204ENST00000586796 EPM2AIP1Q7L775 607 aaPredicted RBP23.43■■□□□ 1.34
RETREG3-204ENST00000586796 KLHL23Q8NBE8 558 aa23.43■■□□□ 1.34
RETREG3-204ENST00000586796 GSTCDQ8NEC7 633 aa23.43■■□□□ 1.34
RETREG3-204ENST00000586796 RSPH1Q8WYR4 309 aa23.43■■□□□ 1.34
RETREG3-204ENST00000586796 POMGNT1Q8WZA1 660 aa23.43■■□□□ 1.34
RETREG3-204ENST00000586796 ZNF558Q96NG5 402 aa23.43■■□□□ 1.34
RETREG3-204ENST00000586796 DNAJB4Q9UDY4 337 aa23.43■■□□□ 1.34
RETREG3-204ENST00000586796 HOOK1Q9UJC3 728 aaKnown RBP23.43■■□□□ 1.34
RETREG3-204ENST00000586796 A0A0B4J269 797 aa23.42■■□□□ 1.34
RETREG3-204ENST00000586796 NT5C1B-RDH14C9J2C7 533 aa23.42■■□□□ 1.34
RETREG3-204ENST00000586796 EIF3DO15371 548 aaKnown RBP eCLIP23.42■■□□□ 1.34
RETREG3-204ENST00000586796 RB1P06400 928 aa23.42■■□□□ 1.34
RETREG3-204ENST00000586796 TNFSF9P41273 254 aa23.42■■□□□ 1.34
RETREG3-204ENST00000586796 PSMD2Q13200 908 aa23.42■■□□□ 1.34
RETREG3-204ENST00000586796 GLRA4Q5JXX5 417 aa23.42■■□□□ 1.34
RETREG3-204ENST00000586796 ZBTB41Q5SVQ8 909 aa23.42■■□□□ 1.34
RETREG3-204ENST00000586796 ZNF507Q8TCN5 953 aa23.42■■□□□ 1.34
RETREG3-204ENST00000586796 SCFD1Q8WVM8 642 aa23.42■■□□□ 1.34
RETREG3-204ENST00000586796 C11orf84Q9BUA3 381 aaPredicted RBP23.42■■□□□ 1.34
RETREG3-204ENST00000586796 PLVAPQ9BX97 442 aa23.42■■□□□ 1.34
RETREG3-204ENST00000586796 ALG13Q9NP73 1137 aaKnown RBP23.42■■□□□ 1.34
RETREG3-204ENST00000586796 TOPORSQ9NS56 1045 aaPredicted RBP23.42■■□□□ 1.34
RETREG3-204ENST00000586796 PLAGL2Q9UPG8 496 aa23.42■■□□□ 1.34
RETREG3-204ENST00000586796 C5orf67F2Z3F1 127 aa23.41■■□□□ 1.34
RETREG3-204ENST00000586796 H3BNC9 293 aa23.41■■□□□ 1.34
RETREG3-204ENST00000586796 OGTO15294 1046 aa23.41■■□□□ 1.34
RETREG3-204ENST00000586796 INPPL1O15357 1258 aa23.41■■□□□ 1.34
RETREG3-204ENST00000586796 B4GALT3O60512 393 aa23.41■■□□□ 1.34
RETREG3-204ENST00000586796 FOSL2P15408 326 aa23.41■■□□□ 1.34
RETREG3-204ENST00000586796 HOXD13P35453 343 aa23.41■■□□□ 1.34
RETREG3-204ENST00000586796 ALDH7A1P49419 539 aaKnown RBP23.41■■□□□ 1.34
RETREG3-204ENST00000586796 ADGRE1Q14246 886 aa23.41■■□□□ 1.34
RETREG3-204ENST00000586796 KIAA0895Q8NCT3 520 aa23.41■■□□□ 1.34
RETREG3-204ENST00000586796 NOC3LQ8WTT2 800 aaKnown RBP23.41■■□□□ 1.34
RETREG3-204ENST00000586796 AGO2Q9UKV8 859 aaKnown RBP23.41■■□□□ 1.34
RETREG3-204ENST00000586796 SZT2Q5T011 3432 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 CHD9Q3L8U1 2897 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 PTGESO14684 152 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 LPXNO60711 386 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 CXCL8P10145 99 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 ADSSP30520 456 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 SLC11A1P49279 550 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 ACOT2P49753 483 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 GRIK3Q13003 919 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 FAM212AQ96EL1 285 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 PCIF1Q9H4Z3 704 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 STYXL1Q9Y6J8 313 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 NLRC5Q86WI3 1866 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 KIAA1671Q9BY89 1806 aa23.4■■□□□ 1.34
RETREG3-204ENST00000586796 GRM6O15303 877 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 FGF18O76093 207 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 RHOBTB3O94955 611 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 SMC2O95347 1197 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 ITGB1P05556 798 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 THP07101 528 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 GALTP07902 379 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 CLTAP09496 248 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 OR1G1P47890 313 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 KCNB1Q14721 858 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 ARMCX5Q6P1M9 558 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 MICALL1Q8N3F8 863 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 RABGGTAQ92696 567 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 P2RX5Q93086 422 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 SMARCE1Q969G3 411 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 SAAL1Q96ER3 474 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 SNX27Q96L92 541 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 CBWD1Q9BRT8 395 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 RPF1Q9H9Y2 349 aaKnown RBP23.39■■□□□ 1.33
RETREG3-204ENST00000586796 LMBRD1Q9NUN5 540 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 SPG21Q9NZD8 308 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 CACNG4Q9UBN1 327 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms