RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 LRP10Q7Z4F1 713 aa6.06□□□□□ -1.44
KARSP3-201ENST00000571212 GLIS2Q9BZE0 524 aaPredicted RBP6.06□□□□□ -1.44
KARSP3-201ENST00000571212 DEF6Q9H4E7 631 aa6.06□□□□□ -1.44
KARSP3-201ENST00000571212 LRRC37AA6NMS7 1700 aa6.06□□□□□ -1.44
KARSP3-201ENST00000571212 ESYT3A0FGR9 886 aa6.05□□□□□ -1.44
KARSP3-201ENST00000571212 H7C1D1 291 aa6.05□□□□□ -1.44
KARSP3-201ENST00000571212 ARVCFO00192 962 aa6.05□□□□□ -1.44
KARSP3-201ENST00000571212 RAD17O75943 681 aa6.05□□□□□ -1.44
KARSP3-201ENST00000571212 CRTAMO95727 393 aa6.05□□□□□ -1.44
KARSP3-201ENST00000571212 CHGBP05060 677 aa6.05□□□□□ -1.44
KARSP3-201ENST00000571212 NOGQ13253 232 aa6.05□□□□□ -1.44
KARSP3-201ENST00000571212 GRAPQ13588 217 aa6.05□□□□□ -1.44
KARSP3-201ENST00000571212 GRAPLQ8TC17 118 aaPredicted RBP6.05□□□□□ -1.44
KARSP3-201ENST00000571212 DPF2Q92785 391 aa6.05□□□□□ -1.44
KARSP3-201ENST00000571212 KISS1RQ969F8 398 aaPredicted RBP6.05□□□□□ -1.44
KARSP3-201ENST00000571212 IPO9Q96P70 1041 aaKnown RBP6.05□□□□□ -1.44
KARSP3-201ENST00000571212 LRRC37BQ96QE4 947 aa6.05□□□□□ -1.44
KARSP3-201ENST00000571212 THUMPD2Q9BTF0 503 aaKnown RBP6.05□□□□□ -1.44
KARSP3-201ENST00000571212 DHRS4Q9BTZ2 278 aa6.05□□□□□ -1.44
KARSP3-201ENST00000571212 KATNBL1Q9H079 304 aa6.05□□□□□ -1.44
KARSP3-201ENST00000571212 CNOT7Q9UIV1 285 aaKnown RBP6.05□□□□□ -1.44
KARSP3-201ENST00000571212 YDJCA8MPS7 323 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 PATE3B3GLJ2 98 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 WNT9AO14904 365 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 HOXB7P09629 217 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 MC4RP32245 332 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 DNM2P50570 870 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 GNAI1P63096 354 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 NOLC1Q14978 699 aaKnown RBP eCLIP6.04□□□□□ -1.44
KARSP3-201ENST00000571212 DDX46Q7L014 1031 aaKnown RBP6.04□□□□□ -1.44
KARSP3-201ENST00000571212 C16orf59Q7L2K0 433 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 NLGN4XQ8N0W4 816 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 SIRPGQ9P1W8 387 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 TSPYL4Q9UJ04 414 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 MRPS23Q9Y3D9 190 aaKnown RBP6.04□□□□□ -1.44
KARSP3-201ENST00000571212 TSC22D4Q9Y3Q8 395 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 ATP23Q9Y6H3 246 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 SLC4A7Q9Y6M7 1214 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 DDX60Q8IY21 1712 aaKnown RBP6.04□□□□□ -1.44
KARSP3-201ENST00000571212 SH3TC1Q8TE82 1336 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 DUOX1Q9NRD9 1551 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 CCDC66A2RUB6 948 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 ZNF561-AS1K7EIQ3 104 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 AKAP8O43823 692 aaKnown RBP6.04□□□□□ -1.44
KARSP3-201ENST00000571212 ZNF623O75123 536 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 EIF2S2P20042 333 aaKnown RBP6.04□□□□□ -1.44
KARSP3-201ENST00000571212 RRADP55042 308 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 HUNKP57058 714 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 TCIRG1Q13488 830 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 RASA3Q14644 834 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 SEC23AQ15436 765 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 PROSER3Q2NL68 480 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 FSTL4Q6MZW2 842 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 COPS6Q7L5N1 327 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 ZC3H7AQ8IWR0 971 aaKnown RBP6.04□□□□□ -1.44
KARSP3-201ENST00000571212 Q8TCH9 128 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 SREK1Q8WXA9 508 aaKnown RBP6.04□□□□□ -1.44
KARSP3-201ENST00000571212 LMF1Q96S06 567 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 SMURF1Q9HCE7 757 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 SAGE1Q9NXZ1 904 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 ARHGAP28Q9P2N2 729 aa6.04□□□□□ -1.44
KARSP3-201ENST00000571212 TRMT112Q9UI30 125 aaKnown RBP6.04□□□□□ -1.44
KARSP3-201ENST00000571212 SCN9AQ15858 1988 aa6.03□□□□□ -1.44
KARSP3-201ENST00000571212 SHTN1A0MZ66 631 aa6.03□□□□□ -1.44
KARSP3-201ENST00000571212 PSMD14O00487 310 aa6.03□□□□□ -1.44
KARSP3-201ENST00000571212 FOXS1O43638 330 aa6.03□□□□□ -1.44
KARSP3-201ENST00000571212 FSHBP01225 129 aa6.03□□□□□ -1.44
KARSP3-201ENST00000571212 ANXA1P04083 346 aa6.03□□□□□ -1.44
KARSP3-201ENST00000571212 RPS12P25398 132 aaKnown RBP6.03□□□□□ -1.44
KARSP3-201ENST00000571212 GABREP78334 506 aa6.03□□□□□ -1.44
KARSP3-201ENST00000571212 SERINC3Q13530 473 aa6.03□□□□□ -1.44
KARSP3-201ENST00000571212 SF3B3Q15393 1217 aaKnown RBP6.03□□□□□ -1.44
KARSP3-201ENST00000571212 SF3A1Q15459 793 aaKnown RBP6.03□□□□□ -1.44
KARSP3-201ENST00000571212 TCTN3Q6NUS6 607 aa6.03□□□□□ -1.44
KARSP3-201ENST00000571212 RGMBQ6NW40 437 aa6.03□□□□□ -1.44
KARSP3-201ENST00000571212 CISD2Q8N5K1 135 aaKnown RBP6.03□□□□□ -1.44
KARSP3-201ENST00000571212 C2orf69Q8N8R5 385 aa6.03□□□□□ -1.44
KARSP3-201ENST00000571212 GBA2Q9HCG7 927 aaPredicted RBP6.03□□□□□ -1.44
KARSP3-201ENST00000571212 NDOR1Q9UHB4 597 aa6.03□□□□□ -1.44
KARSP3-201ENST00000571212 PSME4Q14997 1843 aa6.03□□□□□ -1.44
KARSP3-201ENST00000571212 PRAMEF25A6NGN4 478 aa6.02□□□□□ -1.45
KARSP3-201ENST00000571212 RASGRP1O95267 797 aa6.02□□□□□ -1.45
KARSP3-201ENST00000571212 C4BPAP04003 597 aaKnown RBP6.02□□□□□ -1.45
KARSP3-201ENST00000571212 CT47B1P0C2W7 299 aaPredicted RBP6.02□□□□□ -1.45
KARSP3-201ENST00000571212 AIMP1Q12904 312 aaKnown RBP6.02□□□□□ -1.45
KARSP3-201ENST00000571212 USP10Q14694 798 aaKnown RBP6.02□□□□□ -1.45
KARSP3-201ENST00000571212 CRY1Q16526 586 aa6.02□□□□□ -1.45
KARSP3-201ENST00000571212 TM4SF20Q53R12 229 aa6.02□□□□□ -1.45
KARSP3-201ENST00000571212 EP400NLQ6ZTU2 488 aa6.02□□□□□ -1.45
KARSP3-201ENST00000571212 KRT26Q7Z3Y9 468 aa6.02□□□□□ -1.45
KARSP3-201ENST00000571212 DCPSQ96C86 337 aaKnown RBP6.02□□□□□ -1.45
KARSP3-201ENST00000571212 DEPDC7Q96QD5 511 aa6.02□□□□□ -1.45
KARSP3-201ENST00000571212 EYA3Q99504 573 aa6.02□□□□□ -1.45
KARSP3-201ENST00000571212 SNTG2Q9NY99 539 aa6.02□□□□□ -1.45
KARSP3-201ENST00000571212 FANCIQ9NVI1 1328 aa6.02□□□□□ -1.45
KARSP3-201ENST00000571212 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.01□□□□□ -1.45
KARSP3-201ENST00000571212 PTGS1P23219 599 aa6.01□□□□□ -1.45
KARSP3-201ENST00000571212 ADCY8P40145 1251 aa6.01□□□□□ -1.45
KARSP3-201ENST00000571212 IL13RA1P78552 427 aa6.01□□□□□ -1.45
KARSP3-201ENST00000571212 KIF23Q02241 960 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms