RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 SIP14410 1827 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 A0A1W2PNR3 127 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 SPINT1O43278 529 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 PSMD10O75832 226 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 TMOD1P28289 359 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 CD52P31358 61 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 AK2P54819 239 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 TMEM62Q0P6H9 643 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 EPC2Q52LR7 807 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 ARSHQ5FYA8 562 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 SNAP47Q5SQN1 464 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 SPRED2Q7Z698 418 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 RTN4RL1Q86UN2 441 aaPredicted RBP11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 MICALL1Q8N3F8 863 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 FIBCD1Q8N539 461 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 CELF2-AS1Q8N7Q2 184 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 AIFM3Q96NN9 605 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 NAP1L4Q99733 375 aaKnown RBP11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 C17orf80Q9BSJ5 609 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 ZFYVE1Q9HBF4 777 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 KANSL3Q9P2N6 904 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 KCNJ14Q9UNX9 436 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 RWDD3Q9Y3V2 267 aa11.03□□□□□ -0.64
HNRNPC-228ENST00000557033 CCDC194A0A1B0GVG4 234 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 ESYT3A0FGR9 886 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 H3BNC9 293 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 DGKIO75912 1065 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 C22orf31O95567 290 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 RB1P06400 928 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 STAG3L1P0CL83 205 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 MSX1P28360 303 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 NEK4P51957 841 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 CRYBB1P53674 252 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 GYS2P54840 703 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 AMPD3Q01432 767 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 PLEKHG6Q3KR16 790 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 PPP4R3AQ6IN85 833 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 B3GNT9Q6UX72 402 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 KIAA0907Q7Z7F0 614 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 TMEM192Q8IY95 271 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 CRIPAKQ8N1N5 446 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 ZNF689Q96CS4 500 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 FAM20AQ96MK3 541 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 CEP44Q9C0F1 390 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 UNC45AQ9H3U1 944 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 DDX56Q9NY93 547 aaKnown RBP11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 ORC3Q9UBD5 711 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 DDX25Q9UHL0 483 aaKnown RBP11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 MTUS1Q9ULD2 1270 aa11.02□□□□□ -0.65
HNRNPC-228ENST00000557033 C5orf67F2Z3F1 127 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 RBAK-RBAKDNI3L0D1 243 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 TBX3O15119 743 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 ZNF862O60290 1169 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 RPS6KA5O75582 802 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 CTDNEP1O95476 244 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 TDP2O95551 362 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 CELA3AP09093 270 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 GCFC2P16383 781 aaKnown RBP11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 CTSOP43234 321 aaPredicted RBP11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 CDC42EP1Q00587 391 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 GPM6BQ13491 265 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 ME3Q16798 604 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 INF2Q27J81 1249 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 KRT40Q6A162 431 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 EFCAB12Q6NXP0 572 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 CCDC81Q6ZN84 652 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 AGMOQ6ZNB7 445 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 MIER3Q7Z3K6 550 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 NEK8Q86SG6 692 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 METTL13Q8N6R0 699 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 FAM169BQ8N8A8 192 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 ETNPPLQ8TBG4 499 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 GDPD5Q8WTR4 605 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 RC3H2Q9HBD1 1191 aaKnown RBP11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 ERVK-5Q9HDB9 667 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 POLMQ9NP87 494 aaPredicted RBP11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 RGS18Q9NS28 235 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 C1orf112Q9NSG2 853 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 NOC2LQ9Y3T9 749 aaKnown RBP11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 WDR81Q562E7 1941 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 TTC3P53804 2025 aa11.01□□□□□ -0.65
HNRNPC-228ENST00000557033 LOXHD1Q8IVV2 1947 aa11□□□□□ -0.65
HNRNPC-228ENST00000557033 CHMP2AO43633 222 aa11□□□□□ -0.65
HNRNPC-228ENST00000557033 DKC1O60832 514 aaKnown RBP eCLIP11□□□□□ -0.65
HNRNPC-228ENST00000557033 GPR32O75388 356 aa11□□□□□ -0.65
HNRNPC-228ENST00000557033 SASH3O75995 380 aa11□□□□□ -0.65
HNRNPC-228ENST00000557033 BMP1P13497 986 aa11□□□□□ -0.65
HNRNPC-228ENST00000557033 FDPSP14324 419 aaKnown RBP11□□□□□ -0.65
HNRNPC-228ENST00000557033 TFE3P19532 575 aaPredicted RBP11□□□□□ -0.65
HNRNPC-228ENST00000557033 BMPR1AP36894 532 aa11□□□□□ -0.65
HNRNPC-228ENST00000557033 GIPRP48546 466 aa11□□□□□ -0.65
HNRNPC-228ENST00000557033 BTG3Q14201 252 aaPredicted RBP11□□□□□ -0.65
HNRNPC-228ENST00000557033 TARBP2Q15633 366 aaKnown RBP11□□□□□ -0.65
HNRNPC-228ENST00000557033 LETM2Q2VYF4 491 aa11□□□□□ -0.65
HNRNPC-228ENST00000557033 XKR3Q5GH77 459 aa11□□□□□ -0.65
HNRNPC-228ENST00000557033 SLC24A5Q71RS6 500 aa11□□□□□ -0.65
HNRNPC-228ENST00000557033 TRMT1LQ7Z2T5 733 aaKnown RBP11□□□□□ -0.65
HNRNPC-228ENST00000557033 PRICKLE2Q7Z3G6 844 aa11□□□□□ -0.65
HNRNPC-228ENST00000557033 CCNJLQ8IV13 435 aa11□□□□□ -0.65
HNRNPC-228ENST00000557033 CMTR2Q8IYT2 770 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms