RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 IQCB1Q15051 598 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 SLC30A5Q8TAD4 765 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 ARHGEF2Q92974 986 aaKnown RBP18.44■□□□□ 0.54
PTPN21-208ENST00000556564 PI4K2AQ9BTU6 479 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 TBK1Q9UHD2 729 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 MYBL1P10243 752 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 PARVAQ9NVD7 372 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 TBX20Q9UMR3 447 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 WEE2P0C1S8 567 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 FMO5P49326 533 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 BFSP2Q13515 415 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 CERS5Q8N5B7 392 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 TTC26A0AVF1 554 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 DCAF4L1Q3SXM0 396 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 MCUR1Q96AQ8 359 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 KLC2Q9H0B6 622 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 KIF13AQ9H1H9 1805 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 GOLGA8MH3BSY2 632 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 HSPA6P17066 643 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 KLRC1P26715 233 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 TRIM72Q6ZMU5 477 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 VGLL2Q8N8G2 317 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 DNERQ8NFT8 737 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 ZNF512Q96ME7 567 aaPredicted RBP18.44■□□□□ 0.54
PTPN21-208ENST00000556564 SUDS3Q9H7L9 328 aaPredicted RBP18.44■□□□□ 0.54
PTPN21-208ENST00000556564 SETD4Q9NVD3 440 aa18.44■□□□□ 0.54
PTPN21-208ENST00000556564 RHOBTB3O94955 611 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 ITGB3P05106 788 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 STAG3L1P0CL83 205 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 FMR1Q06787 632 aaKnown RBP eCLIP18.43■□□□□ 0.54
PTPN21-208ENST00000556564 PDXDC1Q6P996 788 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 EXT2Q93063 718 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 CHMP6Q96FZ7 201 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 APEX2Q9UBZ4 518 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 TLK1Q9UKI8 766 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 RSPH10B2B2RC85 870 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 GOLGA8KD6RF30 607 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 RSPH10BP0C881 870 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 SYT2Q8N9I0 419 aaPredicted RBP18.43■□□□□ 0.54
PTPN21-208ENST00000556564 PPP1R12CQ9BZL4 782 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 FARP1Q9Y4F1 1045 aaPredicted RBP18.43■□□□□ 0.54
PTPN21-208ENST00000556564 HLA-DRAP01903 254 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 PPIL2Q13356 520 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 KLHL11Q9NVR0 708 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 ZC3H4Q9UPT8 1303 aaKnown RBP18.43■□□□□ 0.54
PTPN21-208ENST00000556564 ALDH5A1P51649 535 aaPredicted RBP18.43■□□□□ 0.54
PTPN21-208ENST00000556564 ADSSL1Q8N142 457 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 CFAP57Q96MR6 1250 aa18.43■□□□□ 0.54
PTPN21-208ENST00000556564 EIF3DO15371 548 aaKnown RBP eCLIP18.42■□□□□ 0.54
PTPN21-208ENST00000556564 TFDP2Q14188 446 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 CHADLQ6NUI6 762 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 RBBP8NLQ8NC74 664 aaPredicted RBP18.42■□□□□ 0.54
PTPN21-208ENST00000556564 NUDCD1Q96RS6 583 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 PLEKHA5Q9HAU0 1116 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 ENTPD7Q9NQZ7 604 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 NCK2O43639 380 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 RNF40O75150 1001 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 SLCO1A2P46721 670 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 YME1L1Q96TA2 773 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 LCMT1Q9UIC8 334 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 CYBBP04839 570 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 SLC12A1Q13621 1099 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 KCTD16Q68DU8 428 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 SOCS4Q8WXH5 440 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 TRIM62Q9BVG3 475 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.42■□□□□ 0.54
PTPN21-208ENST00000556564 DEFB115Q30KQ5 88 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 TADA2BQ86TJ2 420 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 UBA3Q8TBC4 463 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 PDCD2LQ9BRP1 358 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.42■□□□□ 0.54
PTPN21-208ENST00000556564 DPP3Q9NY33 737 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 GRB10Q13322 594 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 SARM1Q6SZW1 724 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 PDE11AQ9HCR9 933 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 XPNPEP3Q9NQH7 507 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 AAASQ9NRG9 546 aa18.42■□□□□ 0.54
PTPN21-208ENST00000556564 H3BRJ5 948 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 GOLGA7BQ2TAP0 167 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 Q4G0T1 1027 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 B4GALNT4Q76KP1 1039 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 ADGRB2O60241 1585 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 CYP11B2P19099 503 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 SOX10P56693 466 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 CNTN2Q02246 1040 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 DGKZQ13574 1117 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 DCP1BQ8IZD4 617 aaKnown RBP18.41■□□□□ 0.54
PTPN21-208ENST00000556564 SHCBP1Q8NEM2 672 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 PYROXD1Q8WU10 500 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 HPDLQ96IR7 371 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 PACSIN2Q9UNF0 486 aaPredicted RBP18.41■□□□□ 0.54
PTPN21-208ENST00000556564 MYPNQ86TC9 1320 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 CLTAP09496 248 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 SYT17Q9BSW7 474 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 RIOX1Q9H6W3 641 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 IRF6O14896 467 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 ALDH1A3P47895 512 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 DHX9Q08211 1270 aaKnown RBP18.41■□□□□ 0.54
PTPN21-208ENST00000556564 TLK2Q86UE8 772 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 L3MBTL3Q96JM7 780 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms