RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 GABRQQ9UN88 632 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 AKT3Q9Y243 479 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 CNTNAP2Q9UHC6 1331 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 A0A0U1RQJ8 604 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 MBLAC1A4D2B0 266 aaPredicted RBP10.1□□□□□ -0.79
GNE-206ENST00000543356 TTLL13PA6NNM8 815 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 ZNF263O14978 683 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 AKR1B10O60218 316 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 KIF5CO60282 957 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 ZEB2O60315 1214 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 SOX5P35711 763 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 PSEN2P49810 448 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 APLP1P51693 650 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 VAV2P52735 878 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 NKX3-2P78367 333 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 MAP2K1Q02750 393 aaPredicted RBP10.1□□□□□ -0.79
GNE-206ENST00000543356 KIAA0753Q2KHM9 967 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 ATF7IP2Q5U623 682 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 PHLDB3Q6NSJ2 640 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 KIAA1328Q86T90 577 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 BRSK2Q8IWQ3 736 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 TXLNBQ8N3L3 684 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 FBXL13Q8NEE6 735 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 ATRIPQ8WXE1 791 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 ZNF592Q92610 1267 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 CGRRF1Q99675 332 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 TSGA10Q9BZW7 698 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 GPR88Q9GZN0 384 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 TOPORSQ9NS56 1045 aaPredicted RBP10.1□□□□□ -0.79
GNE-206ENST00000543356 TNFSF13BQ9Y275 285 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 EVPLQ92817 2033 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 ATP8B3O60423 1300 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 INO80B-WBP1J3KQ70 363 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 OGTO15294 1046 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 KPNA6O60684 536 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 ZC3H11AO75152 810 aaKnown RBP eCLIP10.09□□□□□ -0.79
GNE-206ENST00000543356 ACOT2P49753 483 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 FLT3LGP49771 235 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 GNG11P61952 73 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 CDC42EP1Q00587 391 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 PRKCZQ05513 592 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 KIF22Q14807 665 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 FSCN1Q16658 493 aaKnown RBP10.09□□□□□ -0.79
GNE-206ENST00000543356 AMHR2Q16671 573 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 NFRKBQ6P4R8 1299 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 SV2AQ7L0J3 742 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 JAKMIP2Q96AA8 810 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 FNBP1Q96RU3 617 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 POP1Q99575 1024 aaKnown RBP10.09□□□□□ -0.79
GNE-206ENST00000543356 INO80BQ9C086 356 aaPredicted RBP10.09□□□□□ -0.79
GNE-206ENST00000543356 UPF3AQ9H1J1 476 aaKnown RBP10.09□□□□□ -0.79
GNE-206ENST00000543356 MINDY3Q9H8M7 445 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 DNAI1Q9UI46 699 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 A0A087WZ62 844 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 SMIM35A0A1B0GVV1 85 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 MYL3P08590 195 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 CCDC172P0C7W6 258 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 DLATP10515 647 aaKnown RBP10.09□□□□□ -0.79
GNE-206ENST00000543356 GJA9P57773 515 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 SP3Q02447 781 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 DRAP1Q14919 205 aaPredicted RBP10.09□□□□□ -0.79
GNE-206ENST00000543356 SLC18A3Q16572 532 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 ZBTB41Q5SVQ8 909 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 EP400NLQ6ZTU2 488 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 ARHGEF19Q8IW93 802 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 KIAA0319LQ8IZA0 1049 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 FDXACB1Q9BRP7 624 aaPredicted RBP10.09□□□□□ -0.79
GNE-206ENST00000543356 IFIH1Q9BYX4 1025 aaKnown RBP10.09□□□□□ -0.79
GNE-206ENST00000543356 SETD4Q9NVD3 440 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 RAB20Q9NX57 234 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 CPSF3Q9UKF6 684 aaKnown RBP10.09□□□□□ -0.79
GNE-206ENST00000543356 PCDHA13Q9Y5I0 950 aa10.09□□□□□ -0.79
GNE-206ENST00000543356 PJA2O43164 708 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 KRT86O43790 486 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 GFPT2O94808 682 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 TBC1D8O95759 1140 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 C4BPAP04003 597 aaKnown RBP10.08□□□□□ -0.8
GNE-206ENST00000543356 VTNP04004 478 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 HOXC8P31273 242 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 AP3M2P53677 418 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 WNT7BP56706 349 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 FAM193AP78312 1265 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 ADAM17P78536 824 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 PURAQ00577 322 aaKnown RBP10.08□□□□□ -0.8
GNE-206ENST00000543356 SURF1Q15526 300 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 ZNF568Q3ZCX4 644 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 ZACNQ401N2 412 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 SRGAP1Q7Z6B7 1085 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 TAS1R2Q8TE23 839 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 ZNF516Q92618 1163 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 SEMA4DQ92854 862 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 FAM81BQ96LP2 452 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 LUC7LQ9NQ29 371 aaKnown RBP10.08□□□□□ -0.8
GNE-206ENST00000543356 FANCGO15287 622 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 B4GALT5O43286 388 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 EVI5O60447 810 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 IQCF3P0C7M6 154 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 BEX3Q00994 111 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 POU5F1Q01860 360 aaKnown RBP10.08□□□□□ -0.8
GNE-206ENST00000543356 CYP27A1Q02318 531 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms