RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 STBD1O95210 358 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 PYGMP11217 842 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 CTNNA1P35221 906 aaKnown RBP15.87■□□□□ 0.13
DDX55-209ENST00000542286 CETN1Q12798 172 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 TNFAIP1Q13829 316 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 SEPT14Q6ZU15 432 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 NIPA1Q7RTP0 329 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 ATP8B4Q8TF62 1192 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 ZNF516Q92618 1163 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 FAM118BQ9BPY3 351 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 NUP85Q9BW27 656 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 INTUQ9ULD6 942 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 SMIM23A6NLE4 172 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 EDN1P05305 212 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 CYP11B1P15538 503 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 ZNF280AP59817 542 aaPredicted RBP15.87■□□□□ 0.13
DDX55-209ENST00000542286 POU5F1Q01860 360 aaKnown RBP15.87■□□□□ 0.13
DDX55-209ENST00000542286 DHX9Q08211 1270 aaKnown RBP15.87■□□□□ 0.13
DDX55-209ENST00000542286 TTC27Q6P3X3 843 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 MICALCLQ6ZW33 695 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 PASD1Q8IV76 773 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 REPS2Q8NFH8 660 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 ZNF653Q96CK0 615 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 KLC4Q9NSK0 619 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 GJB6O95452 261 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 MAPTP10636 758 aaKnown RBP15.86■□□□□ 0.13
DDX55-209ENST00000542286 CCND2P30279 289 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 ELF1P32519 619 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 NF2P35240 595 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 SMTNP53814 917 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 PLTPP55058 493 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 ACTR2P61160 394 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 KRT76Q01546 638 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 MAP4K3Q8IVH8 894 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 FAM71AQ8IYT1 594 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 TMEM130Q8N3G9 435 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 CPA5Q8WXQ8 436 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 POLR3FQ9H1D9 316 aaPredicted RBP15.86■□□□□ 0.13
DDX55-209ENST00000542286 PICK1Q9NRD5 415 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 MCM8Q9UJA3 840 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 TRPC6Q9Y210 931 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 TTLL13PA6NNM8 815 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 O00370 1275 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 LYPLA2O95372 231 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 TMOD1P28289 359 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 LSP1P33241 339 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 HSPA9P38646 679 aaKnown RBP15.86■□□□□ 0.13
DDX55-209ENST00000542286 JAK3P52333 1124 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 GPC5P78333 572 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 ZNF844Q08AG5 666 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 KRT39Q6A163 491 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 SCYL3Q8IZE3 742 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 WHAMMQ8TF30 809 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 HAPLN2Q9GZV7 340 aa15.86■□□□□ 0.13
DDX55-209ENST00000542286 JPH1Q9HDC5 661 aaPredicted RBP15.86■□□□□ 0.13
DDX55-209ENST00000542286 ZNFX1Q9P2E3 1918 aaKnown RBP15.85■□□□□ 0.13
DDX55-209ENST00000542286 ATP4AP20648 1035 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 NLRP11P59045 1033 aaKnown RBP15.85■□□□□ 0.13
DDX55-209ENST00000542286 DR1Q01658 176 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 SF3B2Q13435 895 aaKnown RBP15.85■□□□□ 0.13
DDX55-209ENST00000542286 YTHDF3Q7Z739 585 aaKnown RBP15.85■□□□□ 0.13
DDX55-209ENST00000542286 RUBCNQ92622 972 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 ZBTB10Q96DT7 871 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 EPN3Q9H201 632 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 RAB20Q9NX57 234 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 CYP39A1Q9NYL5 469 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 ANKFY1Q9P2R3 1169 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 H0YGN5 161 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 CES2O00748 559 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 SHBGP04278 402 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 IBSPP21815 317 aaPredicted RBP15.85■□□□□ 0.13
DDX55-209ENST00000542286 DRP2Q13474 957 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 PREPLQ4J6C6 727 aaPredicted RBP15.85■□□□□ 0.13
DDX55-209ENST00000542286 PRELID2Q8N945 189 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 ZNF564Q8TBZ8 553 aaPredicted RBP15.85■□□□□ 0.13
DDX55-209ENST00000542286 N4BP2L2Q92802 583 aaPredicted RBP15.85■□□□□ 0.13
DDX55-209ENST00000542286 CALR3Q96L12 384 aaKnown RBP15.85■□□□□ 0.13
DDX55-209ENST00000542286 GGA3Q9NZ52 723 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 NFS1Q9Y697 457 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 WDR81Q562E7 1941 aa15.85■□□□□ 0.13
DDX55-209ENST00000542286 SPOPO43791 374 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 NR1D1P20393 614 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 ANXA13P27216 316 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 BAG6P46379 1132 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 CYP24A1Q07973 514 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 SHC3Q92529 594 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 CCDC189A1A4V9 331 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 GHRHRQ02643 423 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 ACTN3Q08043 901 aaPredicted RBP15.84■□□□□ 0.13
DDX55-209ENST00000542286 SNX1Q13596 522 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 TMC3Q7Z5M5 1100 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 FBXL13Q8NEE6 735 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 FBXO25Q8TCJ0 367 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 ASAP3Q8TDY4 903 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 ZNF473Q8WTR7 871 aaKnown RBP15.84■□□□□ 0.13
DDX55-209ENST00000542286 MIEF2Q96C03 454 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 HERPUD2Q9BSE4 406 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 CYP26B1Q9NR63 512 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 SLC9A2Q9UBY0 812 aa15.84■□□□□ 0.13
DDX55-209ENST00000542286 UTP11Q9Y3A2 253 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 253.4 ms