RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 FLCNQ8NFG4 579 aa19.08■□□□□ 0.64
PDCD2-207ENST00000539212 CMASQ8NFW8 434 aaPredicted RBP19.08■□□□□ 0.64
PDCD2-207ENST00000539212 SMG7Q92540 1137 aaKnown RBP19.08■□□□□ 0.64
PDCD2-207ENST00000539212 POLR3CQ9BUI4 534 aaPredicted RBP19.08■□□□□ 0.64
PDCD2-207ENST00000539212 MFSD1Q9H3U5 465 aa19.08■□□□□ 0.64
PDCD2-207ENST00000539212 FZD8Q9H461 694 aa19.08■□□□□ 0.64
PDCD2-207ENST00000539212 KIF4AO95239 1232 aa19.07■□□□□ 0.64
PDCD2-207ENST00000539212 TDGQ13569 410 aa19.07■□□□□ 0.64
PDCD2-207ENST00000539212 HSP90AA2PQ14568 343 aaPredicted RBP19.07■□□□□ 0.64
PDCD2-207ENST00000539212 SAFBQ15424 915 aaKnown RBP eCLIP19.07■□□□□ 0.64
PDCD2-207ENST00000539212 TMEM132AQ24JP5 1023 aa19.07■□□□□ 0.64
PDCD2-207ENST00000539212 ASTLQ6HA08 431 aaPredicted RBP19.07■□□□□ 0.64
PDCD2-207ENST00000539212 NOSTRINQ8IVI9 506 aa19.07■□□□□ 0.64
PDCD2-207ENST00000539212 PRIMPOLQ96LW4 560 aa19.07■□□□□ 0.64
PDCD2-207ENST00000539212 NACC1Q96RE7 527 aa19.07■□□□□ 0.64
PDCD2-207ENST00000539212 MYADMQ96S97 322 aa19.07■□□□□ 0.64
PDCD2-207ENST00000539212 CCDC113Q9H0I3 377 aa19.07■□□□□ 0.64
PDCD2-207ENST00000539212 WDR6Q9NNW5 1121 aaKnown RBP19.07■□□□□ 0.64
PDCD2-207ENST00000539212 DUSP12Q9UNI6 340 aa19.07■□□□□ 0.64
PDCD2-207ENST00000539212 COL4A3Q01955 1670 aa19.07■□□□□ 0.64
PDCD2-207ENST00000539212 CACNA1HO95180 2353 aa19.06■□□□□ 0.64
PDCD2-207ENST00000539212 ARHGEF35A5YM69 484 aa19.06■□□□□ 0.64
PDCD2-207ENST00000539212 RECQL4O94761 1208 aa19.06■□□□□ 0.64
PDCD2-207ENST00000539212 PRKCBP05771 671 aa19.06■□□□□ 0.64
PDCD2-207ENST00000539212 NPR3P17342 541 aa19.06■□□□□ 0.64
PDCD2-207ENST00000539212 IGFBP6P24592 240 aaPredicted RBP19.06■□□□□ 0.64
PDCD2-207ENST00000539212 PRPF4BQ13523 1007 aaKnown RBP19.06■□□□□ 0.64
PDCD2-207ENST00000539212 USP41Q3LFD5 358 aa19.06■□□□□ 0.64
PDCD2-207ENST00000539212 TTC38Q5R3I4 469 aa19.06■□□□□ 0.64
PDCD2-207ENST00000539212 LIMCH1Q9UPQ0 1083 aa19.06■□□□□ 0.64
PDCD2-207ENST00000539212 ZMYM2Q9UBW7 1377 aa19.06■□□□□ 0.64
PDCD2-207ENST00000539212 MYH11P35749 1972 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 N4BP3O15049 544 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 PI15O43692 258 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 GFRA3O60609 400 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 TADA2AO75478 443 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 CYP11B2P19099 503 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 RPA1P27694 616 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 TUSC3Q13454 348 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 NAB2Q15742 525 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 FAM187BQ17R55 369 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 GET4Q7L5D6 327 aaPredicted RBP19.05■□□□□ 0.64
PDCD2-207ENST00000539212 ERMNQ8TAM6 284 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 DEPTORQ8TB45 409 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 NT5C3AQ9H0P0 336 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 GDAQ9Y2T3 454 aa19.05■□□□□ 0.64
PDCD2-207ENST00000539212 PDCD11Q14690 1871 aaKnown RBP19.05■□□□□ 0.64
PDCD2-207ENST00000539212 SF3B1O75533 1304 aaKnown RBP eCLIP19.04■□□□□ 0.642e-6■■■■■ 45.3
PDCD2-207ENST00000539212 CFHP08603 1231 aa19.04■□□□□ 0.64
PDCD2-207ENST00000539212 CCT6AP40227 531 aaKnown RBP19.04■□□□□ 0.64
PDCD2-207ENST00000539212 NAMPTP43490 491 aa19.04■□□□□ 0.64
PDCD2-207ENST00000539212 MAPK6Q16659 721 aa19.04■□□□□ 0.64
PDCD2-207ENST00000539212 GLRA4Q5JXX5 417 aa19.04■□□□□ 0.64
PDCD2-207ENST00000539212 LILRA6Q6PI73 481 aa19.04■□□□□ 0.64
PDCD2-207ENST00000539212 CEP57Q86XR8 500 aa19.04■□□□□ 0.64
PDCD2-207ENST00000539212 SIX5Q8N196 739 aa19.04■□□□□ 0.64
PDCD2-207ENST00000539212 NOTCH4Q99466 2003 aa19.04■□□□□ 0.64
PDCD2-207ENST00000539212 C2orf40Q9H1Z8 148 aa19.04■□□□□ 0.64
PDCD2-207ENST00000539212 FOXP1Q9H334 677 aaPredicted RBP19.04■□□□□ 0.64
PDCD2-207ENST00000539212 PIDD1Q9HB75 910 aa19.04■□□□□ 0.64
PDCD2-207ENST00000539212 FNIP2Q9P278 1114 aa19.04■□□□□ 0.64
PDCD2-207ENST00000539212 FBXL21Q9UKT6 434 aa19.04■□□□□ 0.64
PDCD2-207ENST00000539212 CITO14578 2027 aa19.03■□□□□ 0.64
PDCD2-207ENST00000539212 ACKR2O00590 384 aa19.03■□□□□ 0.64
PDCD2-207ENST00000539212 ADAM12O43184 909 aa19.03■□□□□ 0.64
PDCD2-207ENST00000539212 NT5DC1Q5TFE4 455 aa19.03■□□□□ 0.64
PDCD2-207ENST00000539212 FAM171A1Q5VUB5 890 aa19.03■□□□□ 0.64
PDCD2-207ENST00000539212 C4orf32Q8N8J7 132 aa19.03■□□□□ 0.64
PDCD2-207ENST00000539212 FBXO18Q8NFZ0 1043 aa19.03■□□□□ 0.64
PDCD2-207ENST00000539212 LLPHQ9BRT6 129 aaKnown RBP19.03■□□□□ 0.64
PDCD2-207ENST00000539212 BHMT2Q9H2M3 363 aa19.03■□□□□ 0.64
PDCD2-207ENST00000539212 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.03■□□□□ 0.64
PDCD2-207ENST00000539212 EPS15L1Q9UBC2 864 aa19.03■□□□□ 0.64
PDCD2-207ENST00000539212 PP2D1A8MPX8 630 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 THP07101 528 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 NTHL1P78549 312 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 GNL2Q13823 731 aaKnown RBP19.02■□□□□ 0.64
PDCD2-207ENST00000539212 PSMD5Q16401 504 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 ELMSAN1Q6PJG2 1045 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 LNX1Q8TBB1 728 aaPredicted RBP19.02■□□□□ 0.64
PDCD2-207ENST00000539212 STAMQ92783 540 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 KIF2CQ99661 725 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 CLSTN3Q9BQT9 956 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 PRKD2Q9BZL6 878 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 PLEKHA4Q9H4M7 779 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 DPP7Q9UHL4 492 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 FBXW11Q9UKB1 542 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 CA14Q9ULX7 337 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 KIAA1024Q9UPX6 916 aa19.02■□□□□ 0.64
PDCD2-207ENST00000539212 KRBA1A5PL33 1030 aa19.01■□□□□ 0.63
PDCD2-207ENST00000539212 ZMYND10O75800 440 aa19.01■□□□□ 0.63
PDCD2-207ENST00000539212 PAPLNO95428 1278 aa19.01■□□□□ 0.63
PDCD2-207ENST00000539212 AOC1P19801 751 aa19.01■□□□□ 0.63
PDCD2-207ENST00000539212 TOB1P50616 345 aaPredicted RBP19.01■□□□□ 0.63
PDCD2-207ENST00000539212 FXR2P51116 673 aaKnown RBP eCLIP19.01■□□□□ 0.63
PDCD2-207ENST00000539212 CLCN5P51795 746 aa19.01■□□□□ 0.63
PDCD2-207ENST00000539212 NUBP1P53384 320 aa19.01■□□□□ 0.63
PDCD2-207ENST00000539212 ORC2Q13416 577 aaPredicted RBP19.01■□□□□ 0.63
PDCD2-207ENST00000539212 HAUS3Q68CZ6 603 aa19.01■□□□□ 0.63
PDCD2-207ENST00000539212 ASCL5Q7RTU5 278 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms