RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 UVSSAQ2YD98 709 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 PLA2G4FQ68DD2 849 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 NOTUMQ6P988 496 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 EXOC8Q8IYI6 725 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 ZNF579Q8NAF0 562 aaKnown RBP18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 SLC7A3Q8WY07 619 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 DNASE1L2Q92874 299 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 KXD1Q9BQD3 176 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 CSRNP2Q9H175 543 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 SEMA4GQ9NTN9 838 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 MRPS17Q9Y2R5 130 aaKnown RBP18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 HES2Q9Y543 173 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 SPEGQ15772 3267 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 COL4A2P08572 1712 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 KLF18A0A0U1RQI7 1052 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 ASAP2O43150 1006 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 NPEPPSP55786 919 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 GRIK3Q13003 919 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 PPM1LQ5SGD2 360 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 MOXD1Q6UVY6 613 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 PRSS55Q6UWB4 352 aaPredicted RBP18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 PRR23CQ6ZRP0 262 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 FERMT3Q86UX7 667 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 GLYCTKQ8IVS8 523 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 DDX1Q92499 740 aaKnown RBP18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 PLA2G2FQ9BZM2 168 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 HEBP1Q9NRV9 189 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 GDE1Q9NZC3 331 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 WRAP73Q9P2S5 460 aaPredicted RBP18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 DNMT3BQ9UBC3 853 aaKnown RBP18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 SF3B1O75533 1304 aaKnown RBP eCLIP18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 TDRD15B5MCY1 1934 aaKnown RBP18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 CEP295Q9C0D2 2601 aa18.13■□□□□ 0.49
CHMP4A-203ENST00000527154 CCDC196A0A1B0GTZ2 297 aa18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 FOXD2O60548 495 aaPredicted RBP18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 XYLBO75191 536 aa18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 RFC5P40937 340 aa18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 LIMK1P53667 647 aa18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 PTENP60484 403 aa18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 NTRK3Q16288 839 aa18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 LIN9Q5TKA1 542 aa18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 RNF149Q8NC42 400 aa18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 TMEM143Q96AN5 459 aa18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 TCEANC2Q96MN5 208 aa18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 ESYT1Q9BSJ8 1104 aa18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 TRPV5Q9NQA5 729 aa18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 ANGPTL2Q9UKU9 493 aa18.12■□□□□ 0.49
CHMP4A-203ENST00000527154 M0R2N6 131 aa18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 EML1O00423 815 aa18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 ADAM12O43184 909 aa18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 PAPSS2O95340 614 aaPredicted RBP18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 SRGAP2CP0DJJ0 459 aa18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 FCARP24071 287 aa18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 QARSP47897 775 aaKnown RBP18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 PPP2R5CQ13362 524 aa18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 RAB33AQ14088 237 aa18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 HSP90AA2PQ14568 343 aaPredicted RBP18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 TBCKQ8TEA7 893 aa18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 ELSPBP1Q96BH3 223 aa18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 CHAMP1Q96JM3 812 aa18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 TTPALQ9BTX7 342 aa18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 NXF3Q9H4D5 531 aaKnown RBP18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 RAB23Q9ULC3 237 aa18.11■□□□□ 0.49
CHMP4A-203ENST00000527154 MAN2B1O00754 1011 aa18.1■□□□□ 0.49
CHMP4A-203ENST00000527154 CCL16O15467 120 aa18.1■□□□□ 0.49
CHMP4A-203ENST00000527154 TDP2O95551 362 aa18.1■□□□□ 0.49
CHMP4A-203ENST00000527154 ADCK5Q3MIX3 580 aa18.1■□□□□ 0.49
CHMP4A-203ENST00000527154 PABPC1LQ4VXU2 614 aaKnown RBP18.1■□□□□ 0.49
CHMP4A-203ENST00000527154 CCDC148Q8NFR7 591 aa18.1■□□□□ 0.49
CHMP4A-203ENST00000527154 PAAF1Q9BRP4 392 aa18.1■□□□□ 0.49
CHMP4A-203ENST00000527154 NFKBIZQ9BYH8 718 aa18.1■□□□□ 0.49
CHMP4A-203ENST00000527154 HCFC1R1Q9NWW0 138 aa18.1■□□□□ 0.49
CHMP4A-203ENST00000527154 VAV3Q9UKW4 847 aa18.1■□□□□ 0.49
CHMP4A-203ENST00000527154 GDF9O60383 454 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 ERLIN2O94905 339 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 ARF4P18085 180 aaPredicted RBP18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 CCR3P51677 355 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 MBTD1Q05BQ5 628 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 PPP2R5DQ14738 602 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 NAB2Q15742 525 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 PSMD5Q16401 504 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 SLC5A9Q2M3M2 681 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 MAP4K3Q8IVH8 894 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 C4orf19Q8IY42 314 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 FBXL16Q8N461 479 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 SLC7A14Q8TBB6 771 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 TCP11Q8WWU5 503 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 CEP170P1Q96L14 293 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 RNF26Q9BY78 433 aaPredicted RBP18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 C22orf23Q9BZE7 217 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 XPNPEP1Q9NQW7 623 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 SH3GLB2Q9NR46 395 aa18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 RALYQ9UKM9 306 aaKnown RBP18.09■□□□□ 0.49
CHMP4A-203ENST00000527154 VWA8A3KMH1 1905 aa18.08■□□□□ 0.49
CHMP4A-203ENST00000527154 A0A1B0GUA9 196 aa18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 HRO43593 1189 aa18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 DKC1O60832 514 aaKnown RBP eCLIP18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 TADA2AO75478 443 aa18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 KIF4AO95239 1232 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms