RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 BRD9Q9H8M2 597 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 HCFC1R1Q9NWW0 138 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 MIOSQ9NXC5 875 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 WASF3Q9UPY6 502 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 MRPS23Q9Y3D9 190 aaKnown RBP19.57■□□□□ 0.72
PVT1-220ENST00000524165 IPPQ9Y573 584 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 AKAP13Q12802 2813 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 PDCD11Q14690 1871 aaKnown RBP19.56■□□□□ 0.72
PVT1-220ENST00000524165 K7ESF4 209 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 STBD1O95210 358 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 CHRNB1P11230 501 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 CIITAP33076 1130 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 MCM5P33992 734 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 GAS6Q14393 721 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 PSAPL1Q6NUJ1 521 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 RTL10Q7L3V2 364 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 RAB11FIP4Q86YS3 637 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 SLC7A14Q8TBB6 771 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 PIK3R5Q8WYR1 880 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 IRF7Q92985 503 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 ADAM33Q9BZ11 813 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 ARRDC1-AS1Q9H2J1 176 aa19.56■□□□□ 0.72
PVT1-220ENST00000524165 SF3B1O75533 1304 aaKnown RBP eCLIP19.55■□□□□ 0.727e-6■■■■■ 104.3
PVT1-220ENST00000524165 HOXA6P31267 233 aa19.55■□□□□ 0.72
PVT1-220ENST00000524165 AXDND1Q5T1B0 1012 aaPredicted RBP19.55■□□□□ 0.72
PVT1-220ENST00000524165 CHD1LQ86WJ1 897 aa19.55■□□□□ 0.72
PVT1-220ENST00000524165 RDM1Q8NG50 284 aa19.55■□□□□ 0.72
PVT1-220ENST00000524165 LENG9Q96B70 501 aa19.55■□□□□ 0.72
PVT1-220ENST00000524165 MCRS1Q96EZ8 462 aa19.55■□□□□ 0.72
PVT1-220ENST00000524165 ZFP42Q96MM3 310 aa19.55■□□□□ 0.72
PVT1-220ENST00000524165 RIT2Q99578 217 aa19.55■□□□□ 0.72
PVT1-220ENST00000524165 RNF39Q9H2S5 420 aa19.55■□□□□ 0.72
PVT1-220ENST00000524165 AVENQ9NQS1 362 aaPredicted RBP19.55■□□□□ 0.72
PVT1-220ENST00000524165 COL4A3BPQ9Y5P4 624 aa19.55■□□□□ 0.72
PVT1-220ENST00000524165 ITPR1Q14643 2758 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 TMEM150BA6NC51 233 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 AXIN1O15169 862 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 TADA2AO75478 443 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 PTGDRQ13258 359 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 MICU3Q86XE3 530 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 SMC5Q8IY18 1101 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 LNX1Q8TBB1 728 aaPredicted RBP19.54■□□□□ 0.72
PVT1-220ENST00000524165 RUFY2Q8WXA3 655 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 SH2D3AQ9BRG2 576 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 TTPALQ9BTX7 342 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 TRMT61BQ9BVS5 477 aaKnown RBP19.54■□□□□ 0.72
PVT1-220ENST00000524165 MINDY3Q9H8M7 445 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 RBM28Q9NW13 759 aaKnown RBP19.54■□□□□ 0.72
PVT1-220ENST00000524165 GIT1Q9Y2X7 761 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 PIAS3Q9Y6X2 628 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 V9GY48 417 aaPredicted RBP19.54■□□□□ 0.72
PVT1-220ENST00000524165 VWA8A3KMH1 1905 aa19.54■□□□□ 0.72
PVT1-220ENST00000524165 TAF4O00268 1085 aa19.53■□□□□ 0.72
PVT1-220ENST00000524165 CHMP2AO43633 222 aa19.53■□□□□ 0.72
PVT1-220ENST00000524165 GAS7O60861 476 aa19.53■□□□□ 0.72
PVT1-220ENST00000524165 EPN2O95208 641 aa19.53■□□□□ 0.72
PVT1-220ENST00000524165 FCARP24071 287 aa19.53■□□□□ 0.72
PVT1-220ENST00000524165 FUT2Q10981 343 aa19.53■□□□□ 0.72
PVT1-220ENST00000524165 PSMD5Q16401 504 aa19.53■□□□□ 0.72
PVT1-220ENST00000524165 PDXDC1Q6P996 788 aa19.53■□□□□ 0.72
PVT1-220ENST00000524165 WDR5BQ86VZ2 330 aa19.53■□□□□ 0.72
PVT1-220ENST00000524165 MAP4K3Q8IVH8 894 aa19.53■□□□□ 0.72
PVT1-220ENST00000524165 GATA6Q92908 595 aa19.53■□□□□ 0.72
PVT1-220ENST00000524165 EIF2AQ9BY44 585 aaKnown RBP19.53■□□□□ 0.72
PVT1-220ENST00000524165 UNC45AQ9H3U1 944 aa19.53■□□□□ 0.72
PVT1-220ENST00000524165 ZNF334Q9HCZ1 680 aaPredicted RBP19.53■□□□□ 0.72
PVT1-220ENST00000524165 MSH4O15457 936 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 AXLP30530 894 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 RAP1GAPP47736 663 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 NOVA1P51513 510 aaKnown RBP19.52■□□□□ 0.72
PVT1-220ENST00000524165 MLLT6P55198 1093 aaPredicted RBP19.52■□□□□ 0.72
PVT1-220ENST00000524165 FOXC1Q12948 553 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 LRRC32Q14392 662 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 GRM2Q14416 872 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 PCBP1Q15365 356 aaKnown RBP eCLIP19.52■□□□□ 0.72
PVT1-220ENST00000524165 CCDC6Q16204 474 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 SLC5A9Q2M3M2 681 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 PLA2G2CQ5R387 149 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 HEATR6Q6AI08 1181 aaKnown RBP19.52■□□□□ 0.72
PVT1-220ENST00000524165 B4GALNT3Q6L9W6 998 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 POTEHQ6S545 545 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 SGMS1Q86VZ5 419 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 GSTCDQ8NEC7 633 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 EXOC6Q8TAG9 804 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 CCDC51Q96ER9 411 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 TEKT3Q9BXF9 490 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 ZFP14Q9HCL3 533 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 HES2Q9Y543 173 aa19.52■□□□□ 0.72
PVT1-220ENST00000524165 ASH1LQ9NR48 2969 aaKnown RBP19.52■□□□□ 0.71
PVT1-220ENST00000524165 RHOP08100 348 aa19.51■□□□□ 0.71
PVT1-220ENST00000524165 GRIK3Q13003 919 aa19.51■□□□□ 0.71
PVT1-220ENST00000524165 RAB33AQ14088 237 aa19.51■□□□□ 0.71
PVT1-220ENST00000524165 HSP90AA2PQ14568 343 aaPredicted RBP19.51■□□□□ 0.71
PVT1-220ENST00000524165 C1orf228Q6PIY5 440 aa19.51■□□□□ 0.71
PVT1-220ENST00000524165 SLC5A5Q92911 643 aa19.51■□□□□ 0.71
PVT1-220ENST00000524165 PCDHGA5Q9Y5G8 931 aa19.51■□□□□ 0.71
PVT1-220ENST00000524165 ZMYM2Q9UBW7 1377 aa19.51■□□□□ 0.71
PVT1-220ENST00000524165 ESYT2A0FGR8 921 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 ADAM12O43184 909 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 ERLIN2O94905 339 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms