RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 TUSC3Q13454 348 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 HSP90AA2PQ14568 343 aaPredicted RBP12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 NBR1Q14596 966 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 ECM1Q16610 540 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 SPATA31D4Q6ZUB0 917 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 PALB2Q86YC2 1186 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 HDAC7Q8WUI4 952 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 RIN2Q8WYP3 895 aaPredicted RBP12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 KIFAP3Q92845 792 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 IFT74Q96LB3 600 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 ADPGKQ9BRR6 497 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 RHOBTB2Q9BYZ6 727 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 RAB34Q9BZG1 259 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 CCDC113Q9H0I3 377 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 BHMT2Q9H2M3 363 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 SMOC2Q9H3U7 446 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 POLD4Q9HCU8 107 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 SNTG2Q9NY99 539 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 FNIP2Q9P278 1114 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 DAXXQ9UER7 740 aaPredicted RBP12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 KIAA1024Q9UPX6 916 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 USP20Q9Y2K6 914 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
CTNNA1-237ENST00000523275 MYO10Q9HD67 2058 aa12.97□□□□□ -0.33
CTNNA1-237ENST00000523275 THP07101 528 aa12.97□□□□□ -0.33
CTNNA1-237ENST00000523275 MYBP10242 640 aa12.97□□□□□ -0.33
CTNNA1-237ENST00000523275 TOB1P50616 345 aaPredicted RBP12.97□□□□□ -0.33
CTNNA1-237ENST00000523275 NUBP1P53384 320 aa12.97□□□□□ -0.33
CTNNA1-237ENST00000523275 CREMQ03060 361 aa12.97□□□□□ -0.33
CTNNA1-237ENST00000523275 TCF15Q12870 199 aa12.97□□□□□ -0.33
CTNNA1-237ENST00000523275 PTGDRQ13258 359 aa12.97□□□□□ -0.33
CTNNA1-237ENST00000523275 IGSF22Q8N9C0 903 aa12.97□□□□□ -0.33
CTNNA1-237ENST00000523275 PAAF1Q9BRP4 392 aa12.97□□□□□ -0.33
CTNNA1-237ENST00000523275 PLEKHA4Q9H4M7 779 aa12.97□□□□□ -0.33
CTNNA1-237ENST00000523275 SF3B1O75533 1304 aaKnown RBP eCLIP12.96□□□□□ -0.334e-7■■■■■ 86.2
CTNNA1-237ENST00000523275 LAD1O00515 517 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 PTGESO14684 152 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 TGM5O43548 720 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 RFPL2O75678 378 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 RECQL4O94761 1208 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 TDGQ13569 410 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 DCAF4L1Q3SXM0 396 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 C8orf34Q49A92 452 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 EEF1DP3Q658K8 133 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 LILRA6Q6PI73 481 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 SMG7Q92540 1137 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 STAMQ92783 540 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 KIFC3Q9BVG8 833 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 IRF2BPLQ9H1B7 796 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 KCNK12Q9HB15 430 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 WDR6Q9NNW5 1121 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 DDX19AQ9NUU7 478 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 CACNG4Q9UBN1 327 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 DNM3Q9UQ16 869 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 PCDHB6Q9Y5E3 794 aa12.96□□□□□ -0.33
CTNNA1-237ENST00000523275 CASTOR2A6NHX0 329 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 K7ERI5 159 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 PAPLNO95428 1278 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 EDN1P05305 212 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 RPL17P18621 184 aaKnown RBP12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 NAB2Q15742 525 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 RTP2Q5QGT7 225 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 NT5DC1Q5TFE4 455 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 ATF7IP2Q5U623 682 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 FAM171A1Q5VUB5 890 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 KRT79Q5XKE5 535 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 PRSS55Q6UWB4 352 aaPredicted RBP12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 APBB1IPQ7Z5R6 666 aaPredicted RBP12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 CEP57Q86XR8 500 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 GLYCTKQ8IVS8 523 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 SNX29Q8TEQ0 813 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 ZNF707Q96C28 371 aaPredicted RBP12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 TTPALQ9BTX7 342 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 NT5C3AQ9H0P0 336 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 CXCL16Q9H2A7 254 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 PIDD1Q9HB75 910 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 ZDHHC7Q9NXF8 308 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 IGSF9Q9P2J2 1179 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 GDAQ9Y2T3 454 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 KIF3AQ9Y496 699 aa12.95□□□□□ -0.34
CTNNA1-237ENST00000523275 CACNA1HO95180 2353 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 CLUHO75153 1309 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 CCDC169A6NNP5 214 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 E9PMD0 336 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 N4BP1O75113 896 aaKnown RBP12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 KIF4AO95239 1232 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 CENPBP07199 599 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 GBP2P32456 591 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 PRPHP41219 470 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 ELAVL2Q12926 359 aaKnown RBP12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 RABEP1Q15276 862 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 IL17AQ16552 155 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 ASTLQ6HA08 431 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 DTHD1Q6ZMT9 781 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 HASPINQ8TF76 798 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 PIK3R5Q8WYR1 880 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 PHOX2BQ99453 314 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 PRKD2Q9BZL6 878 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 MFSD1Q9H3U5 465 aa12.94□□□□□ -0.34
CTNNA1-237ENST00000523275 TNFSF13BQ9Y275 285 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms