RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 GRM2Q14416 872 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 SLC5A9Q2M3M2 681 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 MTERF2Q49AM1 385 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 SOWAHCQ53LP3 525 aaPredicted RBP15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 CNNM3Q8NE01 707 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 SLC7A14Q8TBB6 771 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 ZFP42Q96MM3 310 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 SCNM1Q9BWG6 230 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 NIFKQ9BYG3 293 aaKnown RBP15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 SMOC1Q9H4F8 434 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 TRPV5Q9NQA5 729 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 PIAS3Q9Y6X2 628 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 TMEM150BA6NC51 233 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 SMCO2A6NFE2 343 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 ADAM12O43184 909 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 HOXA6P31267 233 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 HOXC13P31276 330 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 RAP1GAPP47736 663 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 PTGDRQ13258 359 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 RNF43Q68DV7 783 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 NFXL1Q6ZNB6 911 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 WDR5BQ86VZ2 330 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 RAB11FIP4Q86YS3 637 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 MAP4K3Q8IVH8 894 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 PLEKHM2Q8IWE5 1019 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 IRF7Q92985 503 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 SH2D3AQ9BRG2 576 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 TRMT61BQ9BVS5 477 aaKnown RBP15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 OSBPL3Q9H4L5 887 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 MINDY3Q9H8M7 445 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 ZNF334Q9HCZ1 680 aaPredicted RBP15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 C2orf42Q9NWW7 574 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 SEPT9Q9UHD8 586 aaPredicted RBP15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 IPPQ9Y573 584 aa15.55■□□□□ 0.08
NKX3-1-202ENST00000523261 CNTNAP5Q8WYK1 1306 aa15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 CCDC69A6NI79 296 aa15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 MAFO75444 373 aaPredicted RBP15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 STBD1O95210 358 aa15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 CALM1P0DP23 149 aa15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 CALM2P0DP24 149 aa15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 CALM3P0DP25 149 aa15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 CEBPBP17676 345 aa15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 PTH1RQ03431 593 aa15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 UVSSAQ2YD98 709 aa15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 AXDND1Q5T1B0 1012 aaPredicted RBP15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 JAKMIP3Q5VZ66 844 aa15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 LNX1Q8TBB1 728 aaPredicted RBP15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 PIK3R5Q8WYR1 880 aa15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 LENG9Q96B70 501 aa15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 MTA3Q9BTC8 594 aa15.54■□□□□ 0.08
NKX3-1-202ENST00000523261 SH2B2O14492 632 aaPredicted RBP15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 NRG2O14511 850 aaPredicted RBP15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 RHOP08100 348 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 CCNE1P24864 410 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 RBM25P49756 843 aaKnown RBP15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 PSMD5Q16401 504 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 PRR16Q569H4 304 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 XKR3Q5GH77 459 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 CASC1Q6TDU7 716 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 Q6ZS52 159 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 KBTBD6Q86V97 674 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 TMTC2Q8N394 836 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 FANCBQ8NB91 859 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 RABGGTAQ92696 567 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 TTPALQ9BTX7 342 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 EIF2AQ9BY44 585 aaKnown RBP15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 GLT8D2Q9H1C3 349 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 AVENQ9NQS1 362 aaPredicted RBP15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 RBM12Q9NTZ6 932 aaKnown RBP15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 HES2Q9Y543 173 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 PCDHGA5Q9Y5G8 931 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 ADAMTS20P59510 1910 aa15.53■□□□□ 0.08
NKX3-1-202ENST00000523261 LAMA5O15230 3695 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 SF3B1O75533 1304 aaKnown RBP eCLIP15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 PRC1O43663 620 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 TADA2AO75478 443 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 GDI1P31150 447 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 MPLP40238 635 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 LRRC32Q14392 662 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 WDR44Q5JSH3 913 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 FAM78AQ5JUQ0 283 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 TCEAL6Q6IPX3 200 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 CACNA2D4Q7Z3S7 1137 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 SRGAP1Q7Z6B7 1085 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 GSTCDQ8NEC7 633 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 GAB3Q8WWW8 586 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 TCEAL3Q969E4 200 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 KIF12Q96FN5 646 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 ZFP14Q9HCL3 533 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 CACNG4Q9UBN1 327 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 COL4A3BPQ9Y5P4 624 aa15.52■□□□□ 0.08
NKX3-1-202ENST00000523261 CHMP2AO43633 222 aa15.51■□□□□ 0.07
NKX3-1-202ENST00000523261 SFNP31947 248 aa15.51■□□□□ 0.07
NKX3-1-202ENST00000523261 JAK3P52333 1124 aa15.51■□□□□ 0.07
NKX3-1-202ENST00000523261 HDAC1Q13547 482 aaPredicted RBP15.51■□□□□ 0.07
NKX3-1-202ENST00000523261 RAB33AQ14088 237 aa15.51■□□□□ 0.07
NKX3-1-202ENST00000523261 SH3PXD2AQ5TCZ1 1133 aa15.51■□□□□ 0.07
NKX3-1-202ENST00000523261 VITQ6UXI7 678 aa15.51■□□□□ 0.07
NKX3-1-202ENST00000523261 UNC45AQ9H3U1 944 aa15.51■□□□□ 0.07
NKX3-1-202ENST00000523261 VPS45Q9NRW7 570 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms