RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 MRPL42Q9Y6G3 142 aaKnown RBP17.46■□□□□ 0.39
SSBP1-214ENST00000498107 LAMA3Q16787 3333 aa17.45■□□□□ 0.38
SSBP1-214ENST00000498107 ANKRD63C9JTQ0 380 aa17.45■□□□□ 0.38
SSBP1-214ENST00000498107 LDHAP00338 332 aaKnown RBP17.45■□□□□ 0.38
SSBP1-214ENST00000498107 RB1P06400 928 aa17.45■□□□□ 0.38
SSBP1-214ENST00000498107 LAG3P18627 525 aa17.45■□□□□ 0.38
SSBP1-214ENST00000498107 MLH1P40692 756 aa17.45■□□□□ 0.38
SSBP1-214ENST00000498107 POU5F1Q01860 360 aaKnown RBP17.45■□□□□ 0.38
SSBP1-214ENST00000498107 KCNA1Q09470 495 aa17.45■□□□□ 0.38
SSBP1-214ENST00000498107 KNOP1Q1ED39 458 aaKnown RBP17.45■□□□□ 0.38
SSBP1-214ENST00000498107 TMEM192Q8IY95 271 aa17.45■□□□□ 0.38
SSBP1-214ENST00000498107 KIAA0895Q8NCT3 520 aa17.45■□□□□ 0.38
SSBP1-214ENST00000498107 PLVAPQ9BX97 442 aa17.45■□□□□ 0.38
SSBP1-214ENST00000498107 AGO2Q9UKV8 859 aaKnown RBP17.45■□□□□ 0.38
SSBP1-214ENST00000498107 PCDHB12Q9Y5F1 795 aa17.45■□□□□ 0.38
SSBP1-214ENST00000498107 PCDHA5Q9Y5H7 936 aa17.45■□□□□ 0.38
SSBP1-214ENST00000498107 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.45■□□□□ 0.38
SSBP1-214ENST00000498107 RALGAPA2Q2PPJ7 1873 aa17.44■□□□□ 0.38
SSBP1-214ENST00000498107 MBD3O95983 291 aa17.44■□□□□ 0.38
SSBP1-214ENST00000498107 BMPR1AP36894 532 aa17.44■□□□□ 0.38
SSBP1-214ENST00000498107 GRIK3Q13003 919 aa17.44■□□□□ 0.38
SSBP1-214ENST00000498107 SLC39A4Q6P5W5 647 aa17.44■□□□□ 0.38
SSBP1-214ENST00000498107 GLIS3Q8NEA6 775 aa17.44■□□□□ 0.38
SSBP1-214ENST00000498107 SEMA6BQ9H3T3 888 aa17.44■□□□□ 0.38
SSBP1-214ENST00000498107 PLEKHA5Q9HAU0 1116 aa17.44■□□□□ 0.38
SSBP1-214ENST00000498107 TBC1D13Q9NVG8 400 aa17.44■□□□□ 0.38
SSBP1-214ENST00000498107 CITO14578 2027 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 PTMSP20962 102 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 CTNNB1P35222 781 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 PPM1AP35813 382 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 PPP1R2P41236 205 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 ALDH7A1P49419 539 aaKnown RBP17.43■□□□□ 0.38
SSBP1-214ENST00000498107 OSTNP61366 133 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 EPC2Q52LR7 807 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 ZNF658Q5TYW1 1059 aaPredicted RBP17.43■□□□□ 0.38
SSBP1-214ENST00000498107 ARMCX5Q6P1M9 558 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 CD302Q8IX05 232 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 NELFCDQ8IXH7 590 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 GUF1Q8N442 669 aaKnown RBP17.43■□□□□ 0.38
SSBP1-214ENST00000498107 CEP120Q8N960 986 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 FBXO22Q8NEZ5 403 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 ARNTL2Q8WYA1 636 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 ZFP42Q96MM3 310 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 ZNF558Q96NG5 402 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 TSPAN18Q96SJ8 248 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 C11orf84Q9BUA3 381 aaPredicted RBP17.43■□□□□ 0.38
SSBP1-214ENST00000498107 TTYH1Q9H313 450 aaPredicted RBP17.43■□□□□ 0.38
SSBP1-214ENST00000498107 CLSTN2Q9H4D0 955 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 CWH43Q9H720 699 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 RPF1Q9H9Y2 349 aaKnown RBP17.43■□□□□ 0.38
SSBP1-214ENST00000498107 KIAA1586Q9HCI6 787 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 KLK14Q9P0G3 267 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 NLRC5Q86WI3 1866 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 MYO9BQ13459 2157 aa17.43■□□□□ 0.38
SSBP1-214ENST00000498107 C5orf67F2Z3F1 127 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 POMCP01189 267 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 THP07101 528 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 ADSSP30520 456 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 HOXD13P35453 343 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 SCNN1GP51170 649 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 PPP2R3AQ06190 1150 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 STIM1Q13586 685 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 LRRC55Q6ZSA7 311 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 DEFB123Q8N688 67 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 P2RX5Q93086 422 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 SNX27Q96L92 541 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 TMEM175Q9BSA9 504 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 C17orf80Q9BSJ5 609 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 HAPLN2Q9GZV7 340 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 NUP62CLQ9H1M0 184 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 SLC38A7Q9NVC3 462 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 MTUS1Q9ULD2 1270 aa17.42■□□□□ 0.38
SSBP1-214ENST00000498107 TDRD15B5MCY1 1934 aaKnown RBP17.42■□□□□ 0.38
SSBP1-214ENST00000498107 TISP43B9A030 160 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 PDXKO00764 312 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 CALUO43852 315 aaPredicted RBP17.41■□□□□ 0.38
SSBP1-214ENST00000498107 EXTL3O43909 919 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 ZC3H11AO75152 810 aaKnown RBP eCLIP17.41■□□□□ 0.38
SSBP1-214ENST00000498107 ARHGEF15O94989 841 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 ALDH2P05091 517 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 MCM4P33991 863 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 CAMK4Q16566 473 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 COBLL1Q53SF7 1204 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 XKR4Q5GH76 650 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 KCNT2Q6UVM3 1135 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 ALKAL1Q6UXT8 129 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 TRIML1Q8N9V2 468 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 COLGALT1Q8NBJ5 622 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 GSTCDQ8NEC7 633 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 AGPAT3Q9NRZ7 376 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 CNTN3Q9P232 1028 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 KIAA1468Q9P260 1216 aa17.41■□□□□ 0.38
SSBP1-214ENST00000498107 CPSF3Q9UKF6 684 aaKnown RBP17.41■□□□□ 0.38
SSBP1-214ENST00000498107 LAMA2P24043 3122 aaKnown RBP17.41■□□□□ 0.38
SSBP1-214ENST00000498107 TGFB1I1O43294 461 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 XPOTO43592 962 aaKnown RBP17.4■□□□□ 0.38
SSBP1-214ENST00000498107 FAM189A1O60320 539 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 LINC00271P0C7V0 271 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 KCNE1P15382 129 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 SEZ6Q53EL9 994 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms