RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 CDR1P51861 262 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 TCEAL1Q15170 157 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 PPP1R7Q15435 360 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 TKFCQ3LXA3 575 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 FAM102BQ5T8I3 360 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 CYB5D1Q6P9G0 228 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 RNF207Q6ZRF8 634 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 ART4Q93070 314 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 PWWP2AQ96N64 755 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 ELAC2Q9BQ52 826 aaKnown RBP13.96□□□□□ -0.17
PTPN7-217ENST00000495688 ACTR5Q9H9F9 607 aaPredicted RBP13.96□□□□□ -0.17
PTPN7-217ENST00000495688 GGT7Q9UJ14 662 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 ZBTB12Q9Y330 459 aaPredicted RBP13.96□□□□□ -0.17
PTPN7-217ENST00000495688 RAD17O75943 681 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 MTA2O94776 668 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 VIMP08670 466 aaKnown RBP13.96□□□□□ -0.18
PTPN7-217ENST00000495688 EIF2AK2P19525 551 aaKnown RBP13.96□□□□□ -0.18
PTPN7-217ENST00000495688 CHKAP35790 457 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 HSD17B4P51659 736 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 CLUL1Q15846 466 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 CYP1B1Q16678 543 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 C6orf118Q5T5N4 469 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 ARMC9Q7Z3E5 817 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 KRT27Q7Z3Y8 459 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 C12orf56Q8IXR9 622 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 CCDC197Q8NCU1 140 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 MGARPQ8TDB4 240 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 HELQQ8TDG4 1101 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 ZKSCAN4Q969J2 545 aaPredicted RBP13.96□□□□□ -0.18
PTPN7-217ENST00000495688 AGO4Q9HCK5 861 aaKnown RBP13.96□□□□□ -0.18
PTPN7-217ENST00000495688 MLXIPLQ9NP71 852 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 AAASQ9NRG9 546 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 CHST7Q9NS84 486 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 CTNNAL1Q9UBT7 734 aa13.96□□□□□ -0.18
PTPN7-217ENST00000495688 CNOT7Q9UIV1 285 aaKnown RBP13.96□□□□□ -0.18
PTPN7-217ENST00000495688 CNTNAP1P78357 1384 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 PPIP5K2O43314 1243 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 CYP1A2P05177 515 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 RARGP13631 454 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 ADCY2Q08462 1091 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 MTMR1Q13613 665 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 PAXIP1Q6ZW49 1069 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-217ENST00000495688 EXOC3L1Q86VI1 746 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 FAM228AQ86W67 206 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 FAM118BQ9BPY3 351 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 CDC42EP4Q9H3Q1 356 aaKnown RBP13.95□□□□□ -0.18
PTPN7-217ENST00000495688 QTRT2Q9H974 415 aaKnown RBP13.95□□□□□ -0.18
PTPN7-217ENST00000495688 TMOD2Q9NZR1 351 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 ZNF70Q9UC06 446 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-217ENST00000495688 MTUS1Q9ULD2 1270 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 SYNPO2Q9UMS6 1093 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 GRIN3BO60391 1043 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 ECEL1O95672 775 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 AGTP01019 485 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 CNGA1P29973 690 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 CAP2P40123 477 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 RWDD2BP57060 319 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 KRT17Q04695 432 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 PARD3BQ8TEW8 1205 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 PSPC1Q8WXF1 523 aaKnown RBP13.95□□□□□ -0.18
PTPN7-217ENST00000495688 CLEC4DQ8WXI8 215 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 DDX1Q92499 740 aaKnown RBP13.95□□□□□ -0.18
PTPN7-217ENST00000495688 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 GTF3C4Q9UKN8 822 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 CD2APQ9Y5K6 639 aa13.95□□□□□ -0.18
PTPN7-217ENST00000495688 PASKQ96RG2 1323 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 CCT8L1PA6NM43 557 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 O00370 1275 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 VPS41P49754 854 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 PDE6CP51160 858 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 MFAP3P55082 362 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 CDR2Q01850 454 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 LACTB2Q53H82 288 aaPredicted RBP13.94□□□□□ -0.18
PTPN7-217ENST00000495688 SGO2Q562F6 1265 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 XKR9Q5GH70 373 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 PIGWQ7Z7B1 504 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 FAM151AQ8WW52 585 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 PARP2Q9UGN5 583 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 ANAPC7Q9UJX3 599 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 GGPS1O95749 300 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 MAPTP10636 758 aaKnown RBP13.94□□□□□ -0.18
PTPN7-217ENST00000495688 MYCLP12524 364 aaPredicted RBP13.94□□□□□ -0.18
PTPN7-217ENST00000495688 KRT5P13647 590 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 SLMAPQ14BN4 828 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 KRT39Q6A163 491 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 PARP9Q8IXQ6 854 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 TAAR1Q96RJ0 339 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 ASIC3Q9UHC3 531 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 FEM1BQ9UK73 627 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 USP20Q9Y2K6 914 aa13.94□□□□□ -0.18
PTPN7-217ENST00000495688 LOXHD1Q8IVV2 1947 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 CCNE2O96020 404 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 ICAM1P05362 532 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 NPTX2P47972 431 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 CALCOCO2Q13137 446 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 ALCAMQ13740 583 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 CNGA2Q16280 664 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 TNFAIP8L3Q5GJ75 292 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 SLC39A4Q6P5W5 647 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 FAM160B2Q86V87 743 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms