RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 TISP43B9A030 160 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 B4GALT3O60512 393 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 NR1I2O75469 434 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 PBX3P40426 434 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 MATR3P43243 847 aaKnown RBP eCLIP14.81□□□□□ -0.04
COL1A1-208ENST00000494334 RNASELQ05823 741 aaKnown RBP14.81□□□□□ -0.04
COL1A1-208ENST00000494334 DPYDQ12882 1025 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 KMT5BQ4FZB7 885 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 SEZ6Q53EL9 994 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 KANK3Q6NY19 840 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 KCNT2Q6UVM3 1135 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 EPM2AIP1Q7L775 607 aaPredicted RBP14.81□□□□□ -0.04
COL1A1-208ENST00000494334 ZNF507Q8TCN5 953 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 TIGD1Q96MW7 591 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 C11orf84Q9BUA3 381 aaPredicted RBP14.81□□□□□ -0.04
COL1A1-208ENST00000494334 CCDC94Q9BW85 323 aaPredicted RBP14.81□□□□□ -0.04
COL1A1-208ENST00000494334 GBP3Q9H0R5 595 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 SLC39A2Q9NP94 309 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 DNAJB4Q9UDY4 337 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 PLAGL2Q9UPG8 496 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 EXOC7Q9UPT5 735 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 STYXL1Q9Y6J8 313 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 ZMYM2Q9UBW7 1377 aa14.81□□□□□ -0.04
COL1A1-208ENST00000494334 A0A0B4J269 797 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 NT5C1B-RDH14C9J2C7 533 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 PTGESO14684 152 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 GRM6O15303 877 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 ZC3H11AO75152 810 aaKnown RBP eCLIP14.8□□□□□ -0.04
COL1A1-208ENST00000494334 PRPF40AO75400 957 aaKnown RBP14.8□□□□□ -0.04
COL1A1-208ENST00000494334 RPN1P04843 607 aaKnown RBP14.8□□□□□ -0.04
COL1A1-208ENST00000494334 ITGB1P05556 798 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 GALTP07902 379 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 FOSL2P15408 326 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 POU3F3P20264 500 aaPredicted RBP14.8□□□□□ -0.04
COL1A1-208ENST00000494334 IGFBP4P22692 258 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 ADSSP30520 456 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 ALDH7A1P49419 539 aaKnown RBP14.8□□□□□ -0.04
COL1A1-208ENST00000494334 BCAR1P56945 870 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 UBE2HP62256 183 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 STK4Q13043 487 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 POSTNQ15063 836 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 SLFN12LQ6IEE8 588 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 ALKAL1Q6UXT8 129 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 STXBP4Q6ZWJ1 553 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 SPPL3Q8TCT6 385 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 CCDC34Q96HJ3 373 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 ZNF558Q96NG5 402 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 ACAP3Q96P50 834 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 FAM193BQ96PV7 902 aaPredicted RBP14.8□□□□□ -0.04
COL1A1-208ENST00000494334 RPS6KC1Q96S38 1066 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 TMEM206Q9H813 350 aa14.8□□□□□ -0.04
COL1A1-208ENST00000494334 ALG13Q9NP73 1137 aaKnown RBP14.8□□□□□ -0.04
COL1A1-208ENST00000494334 OGTO15294 1046 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 EIF3DO15371 548 aaKnown RBP eCLIP14.79□□□□□ -0.04
COL1A1-208ENST00000494334 MEFVO15553 781 aaPredicted RBP14.79□□□□□ -0.04
COL1A1-208ENST00000494334 FAM189A1O60320 539 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 FGF18O76093 207 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 ALDH2P05091 517 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 HOXD13P35453 343 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 SLC11A1P49279 550 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 YARSP54577 528 aaKnown RBP14.79□□□□□ -0.04
COL1A1-208ENST00000494334 DSC1Q08554 894 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 GRIK3Q13003 919 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 PSMD2Q13200 908 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 SLC10A6Q3KNW5 377 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 XKR4Q5GH76 650 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 COLGALT2Q8IYK4 626 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 SYCP3Q8IZU3 236 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 SLC39A11Q8N1S5 342 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 SCFD1Q8WVM8 642 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 TMEM175Q9BSA9 504 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 MSTO1Q9BUK6 570 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 TOPORSQ9NS56 1045 aaPredicted RBP14.79□□□□□ -0.04
COL1A1-208ENST00000494334 EXOC1Q9NV70 894 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 LMCD1Q9NZU5 365 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 STXBP5LQ9Y2K9 1186 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 MTCH2Q9Y6C9 303 aa14.79□□□□□ -0.04
COL1A1-208ENST00000494334 MYO9BQ13459 2157 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 NRP1O14786 923 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 RHOBTB3O94955 611 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 THP07101 528 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 CLTAP09496 248 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 DNAJB1P25685 340 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 TNFSF9P41273 254 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 PLCB3Q01970 1234 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 PNOCQ13519 176 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 CAMK1Q14012 370 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 NAB2Q15742 525 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 GLRA4Q5JXX5 417 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 ZBTB41Q5SVQ8 909 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 TMEM173Q86WV6 379 aaPredicted RBP14.78□□□□□ -0.04
COL1A1-208ENST00000494334 ELOA2Q8IYF1 753 aaPredicted RBP14.78□□□□□ -0.04
COL1A1-208ENST00000494334 KIAA0895Q8NCT3 520 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 POF1BQ8WVV4 589 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 POMGNT1Q8WZA1 660 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 SNX27Q96L92 541 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 SPG21Q9NZD8 308 aa14.78□□□□□ -0.04
COL1A1-208ENST00000494334 CPSF3Q9UKF6 684 aaKnown RBP14.78□□□□□ -0.04
COL1A1-208ENST00000494334 AGO2Q9UKV8 859 aaKnown RBP14.78□□□□□ -0.04
COL1A1-208ENST00000494334 FAN1Q9Y2M0 1017 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms