RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 TMEM105Q8N8V8 129 aa9.48□□□□□ -0.89
PRKCB-208ENST00000487674 NSUN7Q8NE18 718 aaKnown RBP9.48□□□□□ -0.89
PRKCB-208ENST00000487674 FEZF2Q8TBJ5 459 aa9.48□□□□□ -0.89
PRKCB-208ENST00000487674 ATOH1Q92858 354 aaPredicted RBP9.48□□□□□ -0.89
PRKCB-208ENST00000487674 CPB2Q96IY4 423 aa9.48□□□□□ -0.89
PRKCB-208ENST00000487674 ZFP42Q96MM3 310 aa9.48□□□□□ -0.89
PRKCB-208ENST00000487674 MFSD1Q9H3U5 465 aa9.48□□□□□ -0.89
PRKCB-208ENST00000487674 NXF3Q9H4D5 531 aaKnown RBP9.48□□□□□ -0.89
PRKCB-208ENST00000487674 TTC12Q9H892 705 aaPredicted RBP9.48□□□□□ -0.89
PRKCB-208ENST00000487674 GIT1Q9Y2X7 761 aa9.48□□□□□ -0.89
PRKCB-208ENST00000487674 HES2Q9Y543 173 aa9.48□□□□□ -0.89
PRKCB-208ENST00000487674 B4GALT5O43286 388 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 GFRA3O60609 400 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 LARGE1O95461 756 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 C1RP00736 705 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 GLRA2P23416 452 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 CLCN5P51795 746 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 DSG1Q02413 1049 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 CREMQ03060 361 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 GRIK3Q13003 919 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 TDGQ13569 410 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 TRIM29Q14134 588 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 ME3Q16798 604 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 KIAA0319Q5VV43 1072 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 SLC27A1Q6PCB7 646 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 DIS3L2Q8IYB7 885 aaKnown RBP9.47□□□□□ -0.89
PRKCB-208ENST00000487674 GPR65Q8IYL9 337 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 NECAB1Q8N987 351 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 STAMQ92783 540 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 ZFRQ96KR1 1074 aaKnown RBP9.47□□□□□ -0.89
PRKCB-208ENST00000487674 MTMR9Q96QG7 549 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 COLEC11Q9BWP8 271 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 APOL6Q9BWW8 343 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 POLR3FQ9H1D9 316 aaPredicted RBP9.47□□□□□ -0.89
PRKCB-208ENST00000487674 RXFP1Q9HBX9 757 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.47□□□□□ -0.89
PRKCB-208ENST00000487674 IGSF9Q9P2J2 1179 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 DUSP12Q9UNI6 340 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 CLUHO75153 1309 aa9.47□□□□□ -0.89
PRKCB-208ENST00000487674 MTCL1Q9Y4B5 1905 aaKnown RBP9.46□□□□□ -0.89
PRKCB-208ENST00000487674 DOCK8Q8NF50 2099 aa9.46□□□□□ -0.89
PRKCB-208ENST00000487674 ZFHX2Q9C0A1 2572 aaPredicted RBP9.46□□□□□ -0.89
PRKCB-208ENST00000487674 A0A1B0GUA9 196 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 LRRIQ4A6NIV6 560 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 BTBD18B2RXH4 712 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 PROB1E7EW31 1015 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 F8W810 466 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 H0Y858 1186 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 WNT7AO00755 349 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 USO1O60763 962 aaKnown RBP9.46□□□□□ -0.9
PRKCB-208ENST00000487674 PAPLNO95428 1278 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 NPTXRO95502 500 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 NEFLP07196 543 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 XRCC6P12956 609 aaKnown RBP eCLIP9.46□□□□□ -0.9
PRKCB-208ENST00000487674 TXKP42681 527 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 C6orf132Q5T0Z8 1188 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 CDCA2Q69YH5 1023 aaPredicted RBP9.46□□□□□ -0.9
PRKCB-208ENST00000487674 CWF19L1Q69YN2 538 aaKnown RBP9.46□□□□□ -0.9
PRKCB-208ENST00000487674 FUT10Q6P4F1 479 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 TAS1R1Q7RTX1 841 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 GSTCDQ8NEC7 633 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 MCPH1Q8NEM0 835 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 PIGOQ8TEQ8 1089 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 HDAC7Q8WUI4 952 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 PRIMPOLQ96LW4 560 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 PLEKHA4Q9H4M7 779 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 KCNK12Q9HB15 430 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 WDR6Q9NNW5 1121 aaKnown RBP9.46□□□□□ -0.9
PRKCB-208ENST00000487674 CHST7Q9NS84 486 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 MIOSQ9NXC5 875 aa9.46□□□□□ -0.9
PRKCB-208ENST00000487674 CCDC195A0A1B0GUA6 201 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 DPYSL4O14531 572 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 JAK2O60674 1132 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 N4BP1O75113 896 aaKnown RBP9.45□□□□□ -0.9
PRKCB-208ENST00000487674 SPATA31C1P0DKV0 1188 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 AOC1P19801 751 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 AKAP5P24588 427 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 NBL1P41271 181 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 HSP90AA2PQ14568 343 aaPredicted RBP9.45□□□□□ -0.9
PRKCB-208ENST00000487674 FAM187BQ17R55 369 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 USP41Q3LFD5 358 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 CDR2LQ86X02 465 aaPredicted RBP9.45□□□□□ -0.9
PRKCB-208ENST00000487674 ZBTB8OSQ8IWT0 167 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 FLCNQ8NFG4 579 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 SMG7Q92540 1137 aaKnown RBP9.45□□□□□ -0.9
PRKCB-208ENST00000487674 ZNF707Q96C28 371 aaPredicted RBP9.45□□□□□ -0.9
PRKCB-208ENST00000487674 B3GALT6Q96L58 329 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 GPR62Q9BZJ7 368 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 TUFT1Q9NNX1 390 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 GPRC5CQ9NQ84 441 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 PRMT7Q9NVM4 692 aaPredicted RBP9.45□□□□□ -0.9
PRKCB-208ENST00000487674 ZDHHC7Q9NXF8 308 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 FNIP2Q9P278 1114 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 EPS15L1Q9UBC2 864 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 ADAM28Q9UKQ2 775 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 FBXL21Q9UKT6 434 aa9.45□□□□□ -0.9
PRKCB-208ENST00000487674 SF3B1O75533 1304 aaKnown RBP eCLIP9.45□□□□□ -0.9
PRKCB-208ENST00000487674 USP34Q70CQ2 3546 aa9.44□□□□□ -0.9
PRKCB-208ENST00000487674 N4BP3O15049 544 aa9.44□□□□□ -0.9
PRKCB-208ENST00000487674 TGM5O43548 720 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms