RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ACO2Q99798 780 aaKnown RBP9.09□□□□□ -0.95
HDAC6-221ENST00000477561 REEP2Q9BRK0 252 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 PAAF1Q9BRP4 392 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 TCHPQ9BT92 498 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 TIPINQ9BVW5 301 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 MRPL4Q9BYD3 311 aaKnown RBP9.09□□□□□ -0.95
HDAC6-221ENST00000477561 CCSER1Q9C0I3 900 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 ZHX3Q9H4I2 956 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 TMEM134Q9H6X4 195 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 C17orf75Q9HAS0 396 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 ARHGAP28Q9P2N2 729 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 TNFSF13BQ9Y275 285 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 BRWD1Q9NSI6 2320 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 PHLPP2Q6ZVD8 1323 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 CASTOR2A6NHX0 329 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 PTGESO14684 152 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 SLC26A4O43511 780 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 NR1I2O75469 434 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 FAM13AO94988 1023 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 CTSAP10619 480 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 SSTR3P32745 418 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-221ENST00000477561 SMTNP53814 917 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 KRT85P78386 507 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 GRIK3Q13003 919 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 STRN3Q13033 797 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 SMAD4Q13485 552 aaKnown RBP9.08□□□□□ -0.96
HDAC6-221ENST00000477561 KCNC3Q14003 757 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 GIT2Q14161 759 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 BMS1Q14692 1282 aaKnown RBP9.08□□□□□ -0.96
HDAC6-221ENST00000477561 SLC39A14Q15043 492 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 DCAF4L1Q3SXM0 396 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 ZNF568Q3ZCX4 644 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 SEZ6Q53EL9 994 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 GLRA4Q5JXX5 417 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 RRAGBQ5VZM2 374 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 ATL3Q6DD88 541 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 DYMQ7RTS9 669 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 MYCT1Q8N699 235 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 TMEM161BQ8NDZ6 487 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 HASPINQ8TF76 798 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 SPIRE2Q8WWL2 714 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 LARP4BQ92615 738 aaKnown RBP9.08□□□□□ -0.96
HDAC6-221ENST00000477561 KHSRPQ92945 711 aaKnown RBP eCLIP9.08□□□□□ -0.96
HDAC6-221ENST00000477561 B3GALT6Q96L58 329 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 CDCA3Q99618 268 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-221ENST00000477561 NTPCRQ9BSD7 190 aaKnown RBP9.08□□□□□ -0.96
HDAC6-221ENST00000477561 COLEC11Q9BWP8 271 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 CDT1Q9H211 546 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 PTPRHQ9HD43 1115 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 KCND2Q9NZV8 630 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 CCDC39Q9UFE4 941 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 CDH22Q9UJ99 828 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 FAM50BQ9Y247 325 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 HCFC2Q9Y5Z7 792 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 TTC28Q96AY4 2481 aa9.08□□□□□ -0.96
HDAC6-221ENST00000477561 CARNS1A5YM72 827 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 TADA2AO75478 443 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 SOD2P04179 222 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 THP07101 528 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 MYBP10242 640 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 MAPTP10636 758 aaKnown RBP9.07□□□□□ -0.96
HDAC6-221ENST00000477561 EPCAMP16422 314 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 IGFBP6P24592 240 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-221ENST00000477561 TXLNAP40222 546 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 MATR3P43243 847 aaKnown RBP eCLIP9.07□□□□□ -0.96
HDAC6-221ENST00000477561 NASPP49321 788 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-221ENST00000477561 COASYQ13057 564 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 PTPN14Q15678 1187 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 SMAD2Q15796 467 aaKnown RBP9.07□□□□□ -0.96
HDAC6-221ENST00000477561 SKOR2Q2VWA4 1001 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-221ENST00000477561 ANKRD54Q6NXT1 300 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 KANK3Q6NY19 840 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 HAUS6Q7Z4H7 955 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 GJD3Q8N144 294 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 PDILTQ8N807 584 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 C12orf76Q8N812 135 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-221ENST00000477561 KRI1Q8N9T8 703 aaKnown RBP9.07□□□□□ -0.96
HDAC6-221ENST00000477561 LINC00301Q8NCQ3 95 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 ZNF396Q96N95 335 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-221ENST00000477561 KLHL5Q96PQ7 755 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 GPR62Q9BZJ7 368 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 LARSQ9P2J5 1176 aaKnown RBP9.07□□□□□ -0.96
HDAC6-221ENST00000477561 ANKFY1Q9P2R3 1169 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 CFAP45Q9UL16 551 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 ODF2LQ9ULJ1 636 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 USP15Q9Y4E8 981 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-221ENST00000477561 C5orf42Q9H799 3197 aa9.07□□□□□ -0.96
HDAC6-221ENST00000477561 A0A087X0B3 334 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 K7ENM7 598 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 ABLIM1O14639 778 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 SPTLC2O15270 562 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 TRAK2O60296 914 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 LILRB3O75022 631 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 TBCAO75347 108 aaKnown RBP9.06□□□□□ -0.96
HDAC6-221ENST00000477561 URODP06132 367 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 CNPP09543 421 aaKnown RBP9.06□□□□□ -0.96
HDAC6-221ENST00000477561 WEE2P0C1S8 567 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 SRGAP2BP0DMP2 458 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 MCF2P10911 925 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 PROZP22891 400 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms