RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 PDCP20941 246 aa5.55□□□□□ -1.52
RBM39-231ENST00000477334 SREBF1P36956 1147 aa5.55□□□□□ -1.52
RBM39-231ENST00000477334 GZMKP49863 264 aa5.55□□□□□ -1.52
RBM39-231ENST00000477334 CDSNQ15517 529 aa5.55□□□□□ -1.52
RBM39-231ENST00000477334 RRP12Q5JTH9 1297 aaKnown RBP5.55□□□□□ -1.52
RBM39-231ENST00000477334 FKBP15Q5T1M5 1219 aa5.55□□□□□ -1.52
RBM39-231ENST00000477334 GJC2Q5T442 439 aaPredicted RBP5.55□□□□□ -1.52
RBM39-231ENST00000477334 STON2Q8WXE9 905 aa5.55□□□□□ -1.52
RBM39-231ENST00000477334 KAT5Q92993 513 aa5.55□□□□□ -1.52
RBM39-231ENST00000477334 ZNF512Q96ME7 567 aaPredicted RBP5.55□□□□□ -1.52
RBM39-231ENST00000477334 CAMKK2Q96RR4 588 aa5.55□□□□□ -1.52
RBM39-231ENST00000477334 CDK5RAP1Q96SZ6 601 aaKnown RBP5.55□□□□□ -1.52
RBM39-231ENST00000477334 NUP88Q99567 741 aaPredicted RBP5.55□□□□□ -1.52
RBM39-231ENST00000477334 GTPBP4Q9BZE4 634 aaKnown RBP5.55□□□□□ -1.52
RBM39-231ENST00000477334 SENP6Q9GZR1 1112 aaPredicted RBP5.55□□□□□ -1.52
RBM39-231ENST00000477334 KLC2Q9H0B6 622 aa5.55□□□□□ -1.52
RBM39-231ENST00000477334 MSL2Q9HCI7 577 aa5.55□□□□□ -1.52
RBM39-231ENST00000477334 PNMA8BQ9ULN7 279 aaPredicted RBP5.55□□□□□ -1.52
RBM39-231ENST00000477334 SH3BP1Q9Y3L3 701 aa5.55□□□□□ -1.52
RBM39-231ENST00000477334 PATE3B3GLJ2 98 aa5.54□□□□□ -1.52
RBM39-231ENST00000477334 WNT10BO00744 389 aa5.54□□□□□ -1.52
RBM39-231ENST00000477334 HOXA3O43365 443 aaPredicted RBP5.54□□□□□ -1.52
RBM39-231ENST00000477334 CYP2C19P33261 490 aa5.54□□□□□ -1.52
RBM39-231ENST00000477334 FXR1P51114 621 aaKnown RBP eCLIP5.54□□□□□ -1.52
RBM39-231ENST00000477334 MRPL49Q13405 166 aaKnown RBP5.54□□□□□ -1.52
RBM39-231ENST00000477334 MFSD14BQ5SR56 506 aa5.54□□□□□ -1.52
RBM39-231ENST00000477334 PDZD4Q76G19 769 aaPredicted RBP5.54□□□□□ -1.52
RBM39-231ENST00000477334 D2HGDHQ8N465 521 aa5.54□□□□□ -1.52
RBM39-231ENST00000477334 SH3RF3Q8TEJ3 882 aaPredicted RBP5.54□□□□□ -1.52
RBM39-231ENST00000477334 CEP95Q96GE4 821 aa5.54□□□□□ -1.52
RBM39-231ENST00000477334 LANCL2Q9NS86 450 aa5.54□□□□□ -1.52
RBM39-231ENST00000477334 TDP1Q9NUW8 608 aa5.54□□□□□ -1.52
RBM39-231ENST00000477334 CHPF2Q9P2E5 772 aa5.54□□□□□ -1.52
RBM39-231ENST00000477334 AJAP1Q9UKB5 411 aaPredicted RBP5.54□□□□□ -1.52
RBM39-231ENST00000477334 SLC30A1Q9Y6M5 507 aa5.54□□□□□ -1.52
RBM39-231ENST00000477334 AP1G1O43747 822 aa5.53□□□□□ -1.52
RBM39-231ENST00000477334 AKAP8O43823 692 aaKnown RBP5.53□□□□□ -1.52
RBM39-231ENST00000477334 AMY1AP04745 511 aa5.53□□□□□ -1.52
RBM39-231ENST00000477334 FPR1P21462 350 aa5.53□□□□□ -1.52
RBM39-231ENST00000477334 AKAP5P24588 427 aa5.53□□□□□ -1.52
RBM39-231ENST00000477334 ZNF267Q14586 743 aaPredicted RBP5.53□□□□□ -1.52
RBM39-231ENST00000477334 IFIT1BQ5T764 474 aaKnown RBP5.53□□□□□ -1.52
RBM39-231ENST00000477334 FAM102BQ5T8I3 360 aa5.53□□□□□ -1.52
RBM39-231ENST00000477334 ZNF585AQ6P3V2 769 aa5.53□□□□□ -1.52
RBM39-231ENST00000477334 USP45Q70EL2 814 aa5.53□□□□□ -1.52
RBM39-231ENST00000477334 XYLT1Q86Y38 959 aa5.53□□□□□ -1.52
RBM39-231ENST00000477334 WDR75Q8IWA0 830 aaKnown RBP5.53□□□□□ -1.52
RBM39-231ENST00000477334 ELOA2Q8IYF1 753 aaPredicted RBP5.53□□□□□ -1.52
RBM39-231ENST00000477334 MYO1HQ8N1T3 1032 aa5.53□□□□□ -1.52
RBM39-231ENST00000477334 ZGPATQ8N5A5 531 aaKnown RBP5.53□□□□□ -1.52
RBM39-231ENST00000477334 Q8TCH9 128 aa5.53□□□□□ -1.52
RBM39-231ENST00000477334 MANSC1Q9H8J5 431 aa5.53□□□□□ -1.52
RBM39-231ENST00000477334 TMEM140Q9NV12 185 aa5.53□□□□□ -1.52
RBM39-231ENST00000477334 PCDHB1Q9Y5F3 818 aa5.53□□□□□ -1.52
RBM39-231ENST00000477334 MYBBP1AQ9BQG0 1328 aaKnown RBP5.52□□□□□ -1.53
RBM39-231ENST00000477334 DTNBO60941 627 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 ZNF623O75123 536 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 GPR32O75388 356 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 COMTP21964 271 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 PCSK1P29120 753 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 GUCY1A2P33402 732 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 SELENOPP49908 381 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 MLC1Q15049 377 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 ELAVL1Q15717 326 aaKnown RBP5.52□□□□□ -1.53
RBM39-231ENST00000477334 PPP4R3AQ6IN85 833 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 EPM2AIP1Q7L775 607 aaPredicted RBP5.52□□□□□ -1.53
RBM39-231ENST00000477334 ZNF572Q7Z3I7 529 aaPredicted RBP5.52□□□□□ -1.53
RBM39-231ENST00000477334 POLNQ7Z5Q5 900 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 SPRED1Q7Z699 444 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 RSPH3Q86UC2 560 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 PRR18Q8N4B5 295 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 MB21D1Q8N884 522 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 CLIP3Q96DZ5 547 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 TMX3Q96JJ7 454 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 WWC2-AS2Q96NR7 200 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 DEF6Q9H4E7 631 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 ANLNQ9NQW6 1124 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 RUVBL1Q9Y265 456 aaKnown RBP5.52□□□□□ -1.53
RBM39-231ENST00000477334 TCAF1Q9Y4C2 921 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 ACTL7AQ9Y615 435 aa5.52□□□□□ -1.53
RBM39-231ENST00000477334 MARCH6O60337 910 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 OFD1O75665 1012 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 RAP2AP10114 183 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 IL2RBP14784 551 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 ALOX15P16050 662 aaPredicted RBP5.51□□□□□ -1.53
RBM39-231ENST00000477334 GNAT2P19087 354 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 DDCP20711 480 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 LPOP22079 712 aaPredicted RBP5.51□□□□□ -1.53
RBM39-231ENST00000477334 ALDH1A3P47895 512 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 FLT3LGP49771 235 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 CDC42EP1Q00587 391 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 HHEXQ03014 270 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 TARDBPQ13148 414 aaKnown RBP eCLIP5.51□□□□□ -1.53
RBM39-231ENST00000477334 R3HDM1Q15032 1099 aaKnown RBP5.51□□□□□ -1.53
RBM39-231ENST00000477334 FAM47AQ5JRC9 791 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 AFMIDQ63HM1 303 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 ANKS6Q68DC2 871 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 MFSD5Q6N075 450 aa5.51□□□□□ -1.53
RBM39-231ENST00000477334 CXorf57Q6NSI4 855 aaKnown RBP5.51□□□□□ -1.53
RBM39-231ENST00000477334 C14orf80Q86SX3 495 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms