RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 APBB3O95704 486 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 GNAI3P08754 354 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 HOXA13P31271 388 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-206ENST00000471968 VIPR2P41587 438 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 PTGER3P43115 390 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 TDO2P48775 406 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 SLC14A1Q13336 389 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 CDC37Q16543 378 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-206ENST00000471968 STOX1Q6ZVD7 989 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 RALGPS2Q86X27 583 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-206ENST00000471968 KIAA0319LQ8IZA0 1049 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 SNIP1Q8TAD8 396 aaKnown RBP7.57□□□□□ -1.2
HDAC3-206ENST00000471968 DEPDC1BQ8WUY9 529 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 SEPT1Q8WYJ6 367 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 POM121Q96HA1 1249 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 PI4K2AQ9BTU6 479 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 CSRNP2Q9H175 543 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 DNAAF2Q9NVR5 837 aaKnown RBP7.57□□□□□ -1.2
HDAC3-206ENST00000471968 RTEL1Q9NZ71 1219 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 PLEKHB1Q9UF11 243 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-206ENST00000471968 SLC6A14Q9UN76 642 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 CRYBG3Q68DQ2 2970 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 NID2Q14112 1375 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 THADAQ6YHU6 1953 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 PDZD2O15018 2839 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 MTCL1Q9Y4B5 1905 aaKnown RBP7.56□□□□□ -1.2
HDAC3-206ENST00000471968 CLEC18AA5D8T8 446 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 MEIS3P2A8K0S8 358 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 TNFRSF10BO14763 440 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 RHOP08100 348 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 ATXN1LP0C7T5 689 aaKnown RBP7.56□□□□□ -1.2
HDAC3-206ENST00000471968 PDHBP11177 359 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 KLRC1P26715 233 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 HOXA9P31269 272 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 HSD17B4P51659 736 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 TMPRSS3P57727 454 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 UVSSAQ2YD98 709 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 CLEC18BQ6UXF7 455 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 CLEC18CQ8NCF0 446 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 SLC7A14Q8TBB6 771 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 RSPH1Q8WYR4 309 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 TNPO1Q92973 898 aaKnown RBP7.56□□□□□ -1.2
HDAC3-206ENST00000471968 MBOAT7Q96N66 472 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 ASB16Q96NS5 453 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 INPP4AQ96PE3 977 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-206ENST00000471968 FAM193BQ96PV7 902 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-206ENST00000471968 GAD1Q99259 594 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.56□□□□□ -1.2
HDAC3-206ENST00000471968 UBA5Q9GZZ9 404 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 EPB41L4AQ9HCS5 686 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-206ENST00000471968 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.56□□□□□ -1.2
HDAC3-206ENST00000471968 MARCH5Q9NX47 278 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 TOR4AQ9NXH8 423 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 EBF1Q9UH73 591 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 PCOLCE2Q9UKZ9 415 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 GON4LQ3T8J9 2241 aa7.56□□□□□ -1.2
HDAC3-206ENST00000471968 ADAMTS9Q9P2N4 1935 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 ARHGAP33O14559 1287 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 OPLAHO14841 1288 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 SUV39H1O43463 412 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 CBFA2T3O75081 653 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 RNF40O75150 1001 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 GPR32O75388 356 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 OFD1O75665 1012 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 VTNP04004 478 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 GOLGA8HP0CJ92 632 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 ITPKAP23677 461 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 GRNP28799 593 aaKnown RBP7.55□□□□□ -1.2
HDAC3-206ENST00000471968 MRPS9P82933 396 aaKnown RBP7.55□□□□□ -1.2
HDAC3-206ENST00000471968 TLE1Q04724 770 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 ZNF543Q08ER8 600 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 UBE3CQ15386 1083 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 DUOXA1Q1HG43 343 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 CCDC157Q569K6 752 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 C6orf118Q5T5N4 469 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 GIMAP6Q6P9H5 292 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 LPCAT2Q7L5N7 544 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 AACSQ86V21 672 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 YAF2Q8IY57 180 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 RNF168Q8IYW5 571 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-206ENST00000471968 FAM26EQ8N5C1 309 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 SETD7Q8WTS6 366 aaKnown RBP7.55□□□□□ -1.2
HDAC3-206ENST00000471968 FGF11Q92914 225 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 STRBPQ96SI9 672 aaKnown RBP7.55□□□□□ -1.2
HDAC3-206ENST00000471968 TMEM175Q9BSA9 504 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 PRDM16Q9HAZ2 1276 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 GTSE1Q9NYZ3 720 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 FNIP2Q9P278 1114 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 NOTCH4Q99466 2003 aa7.55□□□□□ -1.2
HDAC3-206ENST00000471968 NCANO14594 1321 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 PI4KAP42356 2102 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 DKK1O94907 266 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 APPP05067 770 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 SERPINF2P08697 491 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 SKIP12755 728 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 FGFR4P22455 802 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 PHKA2P46019 1235 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 OR1G1P47890 313 aa7.54□□□□□ -1.2
HDAC3-206ENST00000471968 SMAD1Q15797 465 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms