RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 CXCL16Q9H2A7 254 aa23.05■■□□□ 1.28
SREBF1-210ENST00000471445 KMT5AQ9NQR1 393 aa23.05■■□□□ 1.28
SREBF1-210ENST00000471445 KCND2Q9NZV8 630 aa23.05■■□□□ 1.28
SREBF1-210ENST00000471445 SSX2IPQ9Y2D8 614 aa23.05■■□□□ 1.28
SREBF1-210ENST00000471445 DSG1Q02413 1049 aa23.04■■□□□ 1.28
SREBF1-210ENST00000471445 NAB2Q15742 525 aa23.04■■□□□ 1.28
SREBF1-210ENST00000471445 CES5AQ6NT32 575 aa23.04■■□□□ 1.28
SREBF1-210ENST00000471445 TAS1R1Q7RTX1 841 aa23.04■■□□□ 1.28
SREBF1-210ENST00000471445 RPGRIP1Q96KN7 1286 aa23.04■■□□□ 1.28
SREBF1-210ENST00000471445 NECTIN4Q96NY8 510 aa23.04■■□□□ 1.28
SREBF1-210ENST00000471445 PLIN2Q99541 437 aa23.04■■□□□ 1.28
SREBF1-210ENST00000471445 CACNG4Q9UBN1 327 aa23.04■■□□□ 1.28
SREBF1-210ENST00000471445 ADAM28Q9UKQ2 775 aa23.04■■□□□ 1.28
SREBF1-210ENST00000471445 PRR33A8MZF0 331 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 C2CD2LO14523 706 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 PLA2G4BP0C869 781 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 GRIN1Q05586 938 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 SF3A1Q15459 793 aaKnown RBP23.03■■□□□ 1.28
SREBF1-210ENST00000471445 RARS2Q5T160 578 aaKnown RBP23.03■■□□□ 1.28
SREBF1-210ENST00000471445 KIAA0319Q5VV43 1072 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 KIAA1841Q6NSI8 718 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 APBB1IPQ7Z5R6 666 aaPredicted RBP23.03■■□□□ 1.28
SREBF1-210ENST00000471445 LRRC15Q8TF66 581 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 SPIRE2Q8WWL2 714 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 INTS4Q96HW7 963 aaKnown RBP23.03■■□□□ 1.28
SREBF1-210ENST00000471445 ACO2Q99798 780 aaKnown RBP23.03■■□□□ 1.28
SREBF1-210ENST00000471445 PAAF1Q9BRP4 392 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 MRPL4Q9BYD3 311 aaKnown RBP23.03■■□□□ 1.28
SREBF1-210ENST00000471445 GPR62Q9BZJ7 368 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 CDT1Q9H211 546 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 POMKQ9H5K3 350 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 SFXN1Q9H9B4 322 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 RXFP1Q9HBX9 757 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 PTPRHQ9HD43 1115 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 CHST7Q9NS84 486 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 RAPGEFL1Q9UHV5 662 aa23.03■■□□□ 1.28
SREBF1-210ENST00000471445 RBM19Q9Y4C8 960 aaKnown RBP23.03■■□□□ 1.28
SREBF1-210ENST00000471445 TECTAO75443 2155 aa23.02■■□□□ 1.28
SREBF1-210ENST00000471445 CASTOR2A6NHX0 329 aa23.02■■□□□ 1.28
SREBF1-210ENST00000471445 ABLIM1O14639 778 aa23.02■■□□□ 1.28
SREBF1-210ENST00000471445 THP07101 528 aa23.02■■□□□ 1.28
SREBF1-210ENST00000471445 KLRC2P26717 231 aa23.02■■□□□ 1.28
SREBF1-210ENST00000471445 MTHFRP42898 656 aa23.02■■□□□ 1.28
SREBF1-210ENST00000471445 HSP90AA2PQ14568 343 aaPredicted RBP23.02■■□□□ 1.28
SREBF1-210ENST00000471445 ZNF568Q3ZCX4 644 aa23.02■■□□□ 1.28
SREBF1-210ENST00000471445 GPR65Q8IYL9 337 aa23.02■■□□□ 1.28
SREBF1-210ENST00000471445 C12orf76Q8N812 135 aaPredicted RBP23.02■■□□□ 1.28
SREBF1-210ENST00000471445 CEP120Q8N960 986 aa23.02■■□□□ 1.28
SREBF1-210ENST00000471445 RABGGTAQ92696 567 aa23.02■■□□□ 1.28
SREBF1-210ENST00000471445 FBXL18Q96ME1 805 aa23.02■■□□□ 1.28
SREBF1-210ENST00000471445 NTPCRQ9BSD7 190 aaKnown RBP23.02■■□□□ 1.28
SREBF1-210ENST00000471445 GDAQ9Y2T3 454 aa23.02■■□□□ 1.28
SREBF1-210ENST00000471445 SFI1A8K8P3 1242 aa23.01■■□□□ 1.27
SREBF1-210ENST00000471445 SLC16A4O15374 487 aa23.01■■□□□ 1.27
SREBF1-210ENST00000471445 TEX28O15482 410 aa23.01■■□□□ 1.27
SREBF1-210ENST00000471445 ADH1AP07327 375 aa23.01■■□□□ 1.27
SREBF1-210ENST00000471445 PLS3P13797 630 aa23.01■■□□□ 1.27
SREBF1-210ENST00000471445 SYT1P21579 422 aa23.01■■□□□ 1.27
SREBF1-210ENST00000471445 PROZP22891 400 aa23.01■■□□□ 1.27
SREBF1-210ENST00000471445 LONP1P36776 959 aaKnown RBP23.01■■□□□ 1.27
SREBF1-210ENST00000471445 UBA7P41226 1012 aa23.01■■□□□ 1.27
SREBF1-210ENST00000471445 GRM5P41594 1212 aa23.01■■□□□ 1.27
SREBF1-210ENST00000471445 RAD51AP2Q09MP3 1159 aa23.01■■□□□ 1.27
SREBF1-210ENST00000471445 RESTQ13127 1097 aa23.01■■□□□ 1.27
SREBF1-210ENST00000471445 RIPOR3Q96MK2 946 aa23.01■■□□□ 1.27
SREBF1-210ENST00000471445 SF3B1O75533 1304 aaKnown RBP eCLIP23.01■■□□□ 1.275e-7■■■■□ 20.1
SREBF1-210ENST00000471445 K7ELQ4 463 aaPredicted RBP23■■□□□ 1.27
SREBF1-210ENST00000471445 KIF4AO95239 1232 aa23■■□□□ 1.27
SREBF1-210ENST00000471445 PLA2G5P39877 138 aa23■■□□□ 1.27
SREBF1-210ENST00000471445 PTPAQ15257 358 aa23■■□□□ 1.27
SREBF1-210ENST00000471445 USP41Q3LFD5 358 aa23■■□□□ 1.27
SREBF1-210ENST00000471445 TMEM161BQ8NDZ6 487 aa23■■□□□ 1.27
SREBF1-210ENST00000471445 CALML4Q96GE6 196 aa23■■□□□ 1.27
SREBF1-210ENST00000471445 B3GALT6Q96L58 329 aa23■■□□□ 1.27
SREBF1-210ENST00000471445 TARS2Q9BW92 718 aaKnown RBP23■■□□□ 1.27
SREBF1-210ENST00000471445 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23■■□□□ 1.27
SREBF1-210ENST00000471445 BLOC1S4Q9NUP1 217 aa23■■□□□ 1.27
SREBF1-210ENST00000471445 KCNG1Q9UIX4 513 aa23■■□□□ 1.27
SREBF1-210ENST00000471445 BRD1O95696 1058 aa22.99■■□□□ 1.27
SREBF1-210ENST00000471445 WEE2P0C1S8 567 aa22.99■■□□□ 1.27
SREBF1-210ENST00000471445 ARSHQ5FYA8 562 aa22.99■■□□□ 1.27
SREBF1-210ENST00000471445 GLRA4Q5JXX5 417 aa22.99■■□□□ 1.27
SREBF1-210ENST00000471445 KANK3Q6NY19 840 aa22.99■■□□□ 1.27
SREBF1-210ENST00000471445 FEZF2Q8TBJ5 459 aa22.99■■□□□ 1.27
SREBF1-210ENST00000471445 KCNN1Q92952 543 aa22.99■■□□□ 1.27
SREBF1-210ENST00000471445 PPP1R10Q96QC0 940 aaKnown RBP22.99■■□□□ 1.27
SREBF1-210ENST00000471445 MAN1C1Q9NR34 630 aa22.99■■□□□ 1.27
SREBF1-210ENST00000471445 ODF2LQ9ULJ1 636 aa22.99■■□□□ 1.27
SREBF1-210ENST00000471445 NR2E1Q9Y466 385 aa22.99■■□□□ 1.27
SREBF1-210ENST00000471445 NPHP3-ACAD11A0A0J9YXS1 232 aa22.98■■□□□ 1.27
SREBF1-210ENST00000471445 TADA2AO75478 443 aa22.98■■□□□ 1.27
SREBF1-210ENST00000471445 GLUD1P00367 558 aa22.98■■□□□ 1.27
SREBF1-210ENST00000471445 MAPTP10636 758 aaKnown RBP22.98■■□□□ 1.27
SREBF1-210ENST00000471445 MCF2P10911 925 aa22.98■■□□□ 1.27
SREBF1-210ENST00000471445 PLCG1P19174 1290 aa22.98■■□□□ 1.27
SREBF1-210ENST00000471445 CACNB1Q02641 598 aaPredicted RBP22.98■■□□□ 1.27
SREBF1-210ENST00000471445 KARSQ15046 597 aaKnown RBP22.98■■□□□ 1.27
SREBF1-210ENST00000471445 XKR4Q5GH76 650 aa22.98■■□□□ 1.27
SREBF1-210ENST00000471445 MPZL3Q6UWV2 235 aa22.98■■□□□ 1.27
SREBF1-210ENST00000471445 TMC5Q6UXY8 1006 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms