RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 ADGRA2Q96PE1 1338 aa6.15□□□□□ -1.43
VPS41-211ENST00000466017 COL11A1P12107 1806 aaPredicted RBP6.15□□□□□ -1.43
VPS41-211ENST00000466017 A0A1B0GVL5 298 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 VWA3AA6NCI4 1184 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 MSH4O15457 936 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 CA12O43570 354 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 SLC37A4O43826 429 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 SORBS3O60504 671 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 KINO60870 393 aaKnown RBP6.14□□□□□ -1.43
VPS41-211ENST00000466017 PSMD10O75832 226 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 CAVIN2O95810 425 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 FCER1AP12319 257 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 XRCC6P12956 609 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS41-211ENST00000466017 PFKFB1P16118 471 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 ITGB5P18084 799 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 CCND2P30279 289 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 MAPK4P31152 587 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 MAP2K2P36507 400 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 ZNF76P36508 570 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 UBA7P41226 1012 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 TECP42680 631 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 SARSP49591 514 aaKnown RBP6.14□□□□□ -1.43
VPS41-211ENST00000466017 GRIN1Q05586 938 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 SPIRE1Q08AE8 756 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 BNIP3Q12983 259 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 NOGQ13253 232 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 PPP2R5CQ13362 524 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 SLBPQ14493 270 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS41-211ENST00000466017 PLS1Q14651 629 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 LRRC14Q15048 493 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 EPHA7Q15375 998 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 STXBP2Q15833 593 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 ZNF792Q3KQV3 632 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 CT47A1Q5JQC4 288 aaPredicted RBP6.14□□□□□ -1.43
VPS41-211ENST00000466017 WIPI1Q5MNZ9 446 aaPredicted RBP6.14□□□□□ -1.43
VPS41-211ENST00000466017 NT5DC1Q5TFE4 455 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 ARHGEF16Q5VV41 709 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 CAVIN1Q6NZI2 390 aaKnown RBP6.14□□□□□ -1.43
VPS41-211ENST00000466017 CNNM4Q6P4Q7 775 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 KCNV1Q6PIU1 500 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 NSMFQ6X4W1 530 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 KRBA2Q6ZNG9 492 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 PLA2G4DQ86XP0 818 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 ANKRD35Q8N283 1001 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 PLD6Q8N2A8 252 aaKnown RBP6.14□□□□□ -1.43
VPS41-211ENST00000466017 SPATA20Q8TB22 786 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 NEK9Q8TD19 979 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 FUCA2Q9BTY2 467 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 WDR11Q9BZH6 1224 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 LRRC27Q9C0I9 530 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 NUP62CLQ9H1M0 184 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 GOLPH3LQ9H4A5 285 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 HOOK1Q9UJC3 728 aaKnown RBP6.14□□□□□ -1.43
VPS41-211ENST00000466017 TUBE1Q9UJT0 475 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 PLAGL2Q9UPG8 496 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 CORINQ9Y5Q5 1042 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 MRVI1Q9Y6F6 885 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 NFASCO94856 1347 aa6.14□□□□□ -1.43
VPS41-211ENST00000466017 RBM47A0AV96 593 aaKnown RBP6.13□□□□□ -1.43
VPS41-211ENST00000466017 SLC15A5A6NIM6 579 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 ASB14A6NK59 587 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 IGF2BP3O00425 579 aaKnown RBP eCLIP6.13□□□□□ -1.43
VPS41-211ENST00000466017 POLR2DO15514 142 aaKnown RBP6.13□□□□□ -1.43
VPS41-211ENST00000466017 MARCH6O60337 910 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 LYPLA2O95372 231 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 PF4P02776 101 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 HOXC6P09630 235 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 ARP10275 920 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 CYP2C8P10632 490 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 YY1P25490 414 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 RPA1P27694 616 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 TXKP42681 527 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 ALDH5A1P51649 535 aaPredicted RBP6.13□□□□□ -1.43
VPS41-211ENST00000466017 MRPL58Q14197 206 aaKnown RBP6.13□□□□□ -1.43
VPS41-211ENST00000466017 KCTD2Q14681 263 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 ZSCAN23Q3MJ62 389 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 GNPTABQ3T906 1256 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 LONRF3Q496Y0 759 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 PRR16Q569H4 304 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 KRT79Q5XKE5 535 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 HAUS3Q68CZ6 603 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 LRSAM1Q6UWE0 723 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 MAMDC4Q6UXC1 1216 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 SLC30A10Q6XR72 485 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 ZNF574Q6ZN55 896 aaPredicted RBP6.13□□□□□ -1.43
VPS41-211ENST00000466017 USP49Q70CQ1 688 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 SPRED2Q7Z698 418 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 CABP7Q86V35 215 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 TRIML1Q8N9V2 468 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 GIMAP8Q8ND71 665 aaPredicted RBP6.13□□□□□ -1.43
VPS41-211ENST00000466017 CNNM3Q8NE01 707 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 ERMNQ8TAM6 284 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 SMCR8Q8TEV9 937 aaPredicted RBP6.13□□□□□ -1.43
VPS41-211ENST00000466017 CALML4Q96GE6 196 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 EPSTI1Q96J88 318 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 MMP19Q99542 508 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 HSD17B14Q9BPX1 270 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 SDF4Q9BRK5 362 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 MMTAG2Q9BU76 263 aaKnown RBP6.13□□□□□ -1.43
VPS41-211ENST00000466017 POLR3CQ9BUI4 534 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms