RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 EME2A4GXA9 379 aaPredicted RBP17.49■□□□□ 0.39
PIKFYVE-206ENST00000443896 SPDYE16A6NNV3 312 aaPredicted RBP17.49■□□□□ 0.39
PIKFYVE-206ENST00000443896 ACTR2P61160 394 aa17.49■□□□□ 0.39
PIKFYVE-206ENST00000443896 EPS8L1Q8TE68 723 aa17.49■□□□□ 0.39
PIKFYVE-206ENST00000443896 NOCTQ9UK39 431 aaKnown RBP17.49■□□□□ 0.39
PIKFYVE-206ENST00000443896 PPP2R3BQ9Y5P8 575 aa17.49■□□□□ 0.39
PIKFYVE-206ENST00000443896 EIF4E1BA6NMX2 242 aaKnown RBP17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 KRIT1O00522 736 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 GPC3P51654 580 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 PRKCEQ02156 737 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 GNPTABQ3T906 1256 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 WHAMMQ8TF30 809 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 SHC3Q92529 594 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 CCDC127Q96BQ5 260 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 CYP26B1Q9NR63 512 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 HOXC10Q9NYD6 342 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 SART1O43290 800 aaKnown RBP17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 FTLP02792 175 aaPredicted RBP17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 MFAP3P55082 362 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 ENPEPQ07075 957 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 TRADDQ15628 312 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 GGA3Q9NZ52 723 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 SEPT9Q9UHD8 586 aaPredicted RBP17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 DOCK5Q9H7D0 1870 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 HSF2BPO75031 334 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 SGPL1O95470 568 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 CHRNB2P17787 502 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 GTF2H1P32780 548 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 ERVK-9P63128 1117 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 DCAF12L1Q5VU92 463 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 TAF1DQ9H5J8 278 aaPredicted RBP17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 ATP6V0A4Q9HBG4 840 aa17.48■□□□□ 0.39
PIKFYVE-206ENST00000443896 OPA1O60313 960 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 LCTP09848 1927 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 CYP24A1Q07973 514 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 BRDTQ58F21 947 aaPredicted RBP17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 NOP9Q86U38 636 aaKnown RBP17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 PPM1KQ8N3J5 372 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 HELQQ8TDG4 1101 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 POMGNT1Q8WZA1 660 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 POP1Q99575 1024 aaKnown RBP17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 CARD9Q9H257 536 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 GPRC5DQ9NZD1 345 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 GOLGA8KD6RF30 607 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 RTN2O75298 545 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 ITGA4P13612 1032 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 GARTP22102 1010 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 MIS18BP1Q6P0N0 1132 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 PCDHB18PQ96TA0 734 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 SGIP1Q9BQI5 828 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 SLITRK6Q9H5Y7 841 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 ARHGAP28Q9P2N2 729 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 MCM8Q9UJA3 840 aa17.47■□□□□ 0.39
PIKFYVE-206ENST00000443896 GZMAP12544 262 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 GPC5P78333 572 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 SP4Q02446 784 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 CUL1Q13616 776 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 SH3D19Q5HYK7 790 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 C11orf63Q6NUN7 778 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 TAS1R3Q7RTX0 852 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 USP37Q86T82 979 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 IQCKQ8N0W5 287 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 FBXL13Q8NEE6 735 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 DDX47Q9H0S4 455 aaKnown RBP17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 SUPT20HL2P0C7V6 817 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 ECHS1P30084 290 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 SUPT20HL1Q3ZLR7 823 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 XKR3Q5GH77 459 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 CEP85LQ5SZL2 805 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 GPD1LQ8N335 351 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 ZIM3Q96PE6 472 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 WDR90Q96KV7 1748 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 HNRNPDLO14979 420 aaKnown RBP17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 CYP26A1O43174 497 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 SP2Q02086 613 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 IFT88Q13099 833 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 PPFIA1Q13136 1202 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 PRPF4BQ13523 1007 aaKnown RBP17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 KCTD19Q17RG1 926 aaPredicted RBP17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 TAS1R2Q8TE23 839 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 IFT74Q96LB3 600 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 TOPORSQ9NS56 1045 aaPredicted RBP17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 RAB20Q9NX57 234 aa17.46■□□□□ 0.39
PIKFYVE-206ENST00000443896 H0YCG3 227 aa17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 ABCD1P33897 745 aa17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 SLC47A2Q86VL8 602 aa17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 TBC1D31Q96DN5 1066 aa17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 RUFY1Q96T51 708 aa17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 POLR3FQ9H1D9 316 aaPredicted RBP17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.45■□□□□ 0.389e-7■■■■■ 70.4
PIKFYVE-206ENST00000443896 KLC4Q9NSK0 619 aa17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 CTTNBP2NLQ9P2B4 639 aa17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 ALG6Q9Y672 507 aa17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 FAM170AA1A519 330 aa17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 FGGP02679 453 aa17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 ICAM3P32942 547 aa17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 GUCY2FP51841 1108 aa17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 SEC24CP53992 1094 aa17.45■□□□□ 0.38
PIKFYVE-206ENST00000443896 HIRAP54198 1017 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms