RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 ACKR2O00590 384 aa22.91■■□□□ 1.26
CPNE1-219ENST00000440240 TRAPPC10P48553 1259 aa22.91■■□□□ 1.26
CPNE1-219ENST00000440240 HSP90AA2PQ14568 343 aaPredicted RBP22.91■■□□□ 1.26
CPNE1-219ENST00000440240 TTC38Q5R3I4 469 aa22.91■■□□□ 1.26
CPNE1-219ENST00000440240 FAM184AQ8NB25 1140 aa22.91■■□□□ 1.26
CPNE1-219ENST00000440240 DEPTORQ8TB45 409 aa22.91■■□□□ 1.26
CPNE1-219ENST00000440240 SMG7Q92540 1137 aaKnown RBP22.91■■□□□ 1.26
CPNE1-219ENST00000440240 B3GALT6Q96L58 329 aa22.91■■□□□ 1.26
CPNE1-219ENST00000440240 ZDHHC7Q9NXF8 308 aa22.91■■□□□ 1.26
CPNE1-219ENST00000440240 KMT2EQ8IZD2 1858 aa22.91■■□□□ 1.26
CPNE1-219ENST00000440240 H0Y858 1186 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 TGM5O43548 720 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 RFPL2O75678 378 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 PAPLNO95428 1278 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 THP07101 528 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 SPATA31D3P0C874 917 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 EFNA5P52803 228 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 LILRA6Q6PI73 481 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 SPATA31D4Q6ZUB0 917 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 NOSTRINQ8IVI9 506 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 TMEM105Q8N8V8 129 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 RABGGTAQ92696 567 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 IFT74Q96LB3 600 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 NT5C3AQ9H0P0 336 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 PDZD7Q9H5P4 517 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 PIDD1Q9HB75 910 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 SNTG2Q9NY99 539 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 NOL7Q9UMY1 257 aaKnown RBP22.9■■□□□ 1.26
CPNE1-219ENST00000440240 DUSP12Q9UNI6 340 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 STK24Q9Y6E0 443 aa22.9■■□□□ 1.26
CPNE1-219ENST00000440240 TDRD15B5MCY1 1934 aaKnown RBP22.9■■□□□ 1.26
CPNE1-219ENST00000440240 CLUHO75153 1309 aa22.89■■□□□ 1.26
CPNE1-219ENST00000440240 PRKCBP05771 671 aa22.89■■□□□ 1.25
CPNE1-219ENST00000440240 MYBP10242 640 aa22.89■■□□□ 1.25
CPNE1-219ENST00000440240 GBP2P32456 591 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-219ENST00000440240 PDIA5Q14554 519 aa22.89■■□□□ 1.25
CPNE1-219ENST00000440240 BSNDQ8WZ55 320 aa22.89■■□□□ 1.25
CPNE1-219ENST00000440240 KIFAP3Q92845 792 aa22.89■■□□□ 1.25
CPNE1-219ENST00000440240 NXPE3Q969Y0 559 aa22.89■■□□□ 1.25
CPNE1-219ENST00000440240 SH2B1Q9NRF2 756 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-219ENST00000440240 LRWD1Q9UFC0 647 aa22.89■■□□□ 1.25
CPNE1-219ENST00000440240 TTLL13PA6NNM8 815 aa22.88■■□□□ 1.25
CPNE1-219ENST00000440240 CCT6AP40227 531 aaKnown RBP22.88■■□□□ 1.25
CPNE1-219ENST00000440240 FXR2P51116 673 aaKnown RBP eCLIP22.88■■□□□ 1.252e-6■■■□□ 18.4
CPNE1-219ENST00000440240 ELAVL2Q12926 359 aaKnown RBP22.88■■□□□ 1.25
CPNE1-219ENST00000440240 ZNF707Q96C28 371 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-219ENST00000440240 PAAF1Q9BRP4 392 aa22.88■■□□□ 1.25
CPNE1-219ENST00000440240 TTPALQ9BTX7 342 aa22.88■■□□□ 1.25
CPNE1-219ENST00000440240 PRKD2Q9BZL6 878 aa22.88■■□□□ 1.25
CPNE1-219ENST00000440240 CCDC113Q9H0I3 377 aa22.88■■□□□ 1.25
CPNE1-219ENST00000440240 FAM86C1Q9NVL1 165 aa22.88■■□□□ 1.25
CPNE1-219ENST00000440240 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.88■■□□□ 1.25
CPNE1-219ENST00000440240 EPS15L1Q9UBC2 864 aa22.88■■□□□ 1.25
CPNE1-219ENST00000440240 FBXL21Q9UKT6 434 aa22.88■■□□□ 1.25
CPNE1-219ENST00000440240 DENND4AQ7Z401 1863 aa22.88■■□□□ 1.25
CPNE1-219ENST00000440240 CASTOR2A6NHX0 329 aa22.87■■□□□ 1.25
CPNE1-219ENST00000440240 PTGESO14684 152 aa22.87■■□□□ 1.25
CPNE1-219ENST00000440240 ST18O60284 1047 aa22.87■■□□□ 1.25
CPNE1-219ENST00000440240 N4BP1O75113 896 aaKnown RBP22.87■■□□□ 1.25
CPNE1-219ENST00000440240 RECQL4O94761 1208 aa22.87■■□□□ 1.25
CPNE1-219ENST00000440240 LIG1P18858 919 aa22.87■■□□□ 1.25
CPNE1-219ENST00000440240 PDXDC1Q6P996 788 aa22.87■■□□□ 1.25
CPNE1-219ENST00000440240 APBB1IPQ7Z5R6 666 aaPredicted RBP22.87■■□□□ 1.25
CPNE1-219ENST00000440240 GLYCTKQ8IVS8 523 aa22.87■■□□□ 1.25
CPNE1-219ENST00000440240 FLCNQ8NFG4 579 aa22.87■■□□□ 1.25
CPNE1-219ENST00000440240 RAB34Q9BZG1 259 aa22.87■■□□□ 1.25
CPNE1-219ENST00000440240 BHMT2Q9H2M3 363 aa22.87■■□□□ 1.25
CPNE1-219ENST00000440240 ZMYND10O75800 440 aa22.86■■□□□ 1.25
CPNE1-219ENST00000440240 RPL17P18621 184 aaKnown RBP22.86■■□□□ 1.25
CPNE1-219ENST00000440240 DCAF4L1Q3SXM0 396 aa22.86■■□□□ 1.25
CPNE1-219ENST00000440240 RTP2Q5QGT7 225 aa22.86■■□□□ 1.25
CPNE1-219ENST00000440240 FAM171A1Q5VUB5 890 aa22.86■■□□□ 1.25
CPNE1-219ENST00000440240 CEP57Q86XR8 500 aa22.86■■□□□ 1.25
CPNE1-219ENST00000440240 C4orf32Q8N8J7 132 aa22.86■■□□□ 1.25
CPNE1-219ENST00000440240 PIK3R5Q8WYR1 880 aa22.86■■□□□ 1.25
CPNE1-219ENST00000440240 CACNG4Q9UBN1 327 aa22.86■■□□□ 1.25
CPNE1-219ENST00000440240 WNT16Q9UBV4 365 aa22.86■■□□□ 1.25
CPNE1-219ENST00000440240 KIAA1024Q9UPX6 916 aa22.86■■□□□ 1.25
CPNE1-219ENST00000440240 USP34Q70CQ2 3546 aa22.86■■□□□ 1.25
CPNE1-219ENST00000440240 K7ERI5 159 aa22.85■■□□□ 1.25
CPNE1-219ENST00000440240 U2AF2P26368 475 aaKnown RBP eCLIP22.85■■□□□ 1.253e-26■□□□□ 9.9
CPNE1-219ENST00000440240 PRSS55Q6UWB4 352 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-219ENST00000440240 HASPINQ8TF76 798 aa22.85■■□□□ 1.25
CPNE1-219ENST00000440240 MYADMQ96S97 322 aa22.85■■□□□ 1.25
CPNE1-219ENST00000440240 USP20Q9Y2K6 914 aa22.85■■□□□ 1.25
CPNE1-219ENST00000440240 C2orf16Q68DN1 1984 aa22.85■■□□□ 1.25
CPNE1-219ENST00000440240 GFRA3O60609 400 aa22.84■■□□□ 1.25
CPNE1-219ENST00000440240 KIF4AO95239 1232 aa22.84■■□□□ 1.25
CPNE1-219ENST00000440240 AOC1P19801 751 aa22.84■■□□□ 1.25
CPNE1-219ENST00000440240 NAB2Q15742 525 aa22.84■■□□□ 1.25
CPNE1-219ENST00000440240 ECM1Q16610 540 aa22.84■■□□□ 1.25
CPNE1-219ENST00000440240 ATF7IP2Q5U623 682 aa22.84■■□□□ 1.25
CPNE1-219ENST00000440240 SIX5Q8N196 739 aa22.84■■□□□ 1.25
CPNE1-219ENST00000440240 SLC44A3Q8N4M1 653 aa22.84■■□□□ 1.25
CPNE1-219ENST00000440240 LNX1Q8TBB1 728 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-219ENST00000440240 RTP3Q9BQQ7 232 aa22.84■■□□□ 1.25
CPNE1-219ENST00000440240 CLSTN3Q9BQT9 956 aa22.84■■□□□ 1.25
CPNE1-219ENST00000440240 DNM3Q9UQ16 869 aa22.84■■□□□ 1.25
CPNE1-219ENST00000440240 GDAQ9Y2T3 454 aa22.84■■□□□ 1.25
CPNE1-219ENST00000440240 ZFP37Q9Y6Q3 630 aaPredicted RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms