RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 OFD1O75665 1012 aa11.46□□□□□ -0.57
HOXD3-203ENST00000432796 ZNF806P0C7X5 589 aa11.46□□□□□ -0.57
HOXD3-203ENST00000432796 SPATA31D3P0C874 917 aa11.46□□□□□ -0.57
HOXD3-203ENST00000432796 DARSP14868 501 aaKnown RBP11.46□□□□□ -0.57
HOXD3-203ENST00000432796 NCLP19338 710 aaKnown RBP11.46□□□□□ -0.57
HOXD3-203ENST00000432796 SPINK2P20155 84 aa11.46□□□□□ -0.57
HOXD3-203ENST00000432796 CLCN3P51790 818 aa11.46□□□□□ -0.57
HOXD3-203ENST00000432796 SRSF5Q13243 272 aaKnown RBP11.46□□□□□ -0.57
HOXD3-203ENST00000432796 SOWAHCQ53LP3 525 aaPredicted RBP11.46□□□□□ -0.57
HOXD3-203ENST00000432796 SPATA31D4Q6ZUB0 917 aa11.46□□□□□ -0.57
HOXD3-203ENST00000432796 NEK8Q86SG6 692 aa11.46□□□□□ -0.57
HOXD3-203ENST00000432796 ZNF280BQ86YH2 543 aa11.46□□□□□ -0.57
HOXD3-203ENST00000432796 FAM160A2Q8N612 972 aaPredicted RBP11.46□□□□□ -0.57
HOXD3-203ENST00000432796 CRYGNQ8WXF5 182 aa11.46□□□□□ -0.57
HOXD3-203ENST00000432796 LPPQ93052 612 aa11.46□□□□□ -0.57
HOXD3-203ENST00000432796 TMEM175Q9BSA9 504 aa11.46□□□□□ -0.57
HOXD3-203ENST00000432796 CHST12Q9NRB3 414 aa11.46□□□□□ -0.57
HOXD3-203ENST00000432796 HEBP1Q9NRV9 189 aa11.46□□□□□ -0.57
HOXD3-203ENST00000432796 ORC3Q9UBD5 711 aaPredicted RBP11.46□□□□□ -0.57
HOXD3-203ENST00000432796 DHX15O43143 795 aaKnown RBP11.45□□□□□ -0.58
HOXD3-203ENST00000432796 GAS2O43903 313 aaKnown RBP11.45□□□□□ -0.58
HOXD3-203ENST00000432796 PFKFB2O60825 505 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 ALDH2P05091 517 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 SKIP12755 728 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 FGFR4P22455 802 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 KRT2P35908 639 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 CXCL12P48061 93 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 GLUD2P49448 558 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 NOVA1P51513 510 aaKnown RBP11.45□□□□□ -0.58
HOXD3-203ENST00000432796 ZNF252P-AS1Q0IIN9 211 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 SCRN1Q12765 414 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 SAFBQ15424 915 aaKnown RBP eCLIP11.45□□□□□ -0.58
HOXD3-203ENST00000432796 INF2Q27J81 1249 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 LONRF3Q496Y0 759 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 XKR3Q5GH77 459 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 EFCAB12Q6NXP0 572 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 GRASPQ7Z6J2 395 aaPredicted RBP11.45□□□□□ -0.58
HOXD3-203ENST00000432796 LONP2Q86WA8 852 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 NLRP7Q8WX94 980 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 SLC5A5Q92911 643 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 FAM20AQ96MK3 541 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 KXD1Q9BQD3 176 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 LARP6Q9BRS8 491 aaKnown RBP11.45□□□□□ -0.58
HOXD3-203ENST00000432796 INO80BQ9C086 356 aaPredicted RBP11.45□□□□□ -0.58
HOXD3-203ENST00000432796 FAN1Q9Y2M0 1017 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 FREM2Q5SZK8 3169 aa11.45□□□□□ -0.58
HOXD3-203ENST00000432796 MEIS3P2A8K0S8 358 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 CHURC1-FNTBB4DL54 471 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 MAN2B1O00754 1011 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 NRP1O14786 923 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 CCNT1O60563 726 aaKnown RBP11.44□□□□□ -0.58
HOXD3-203ENST00000432796 ZMYND10O75800 440 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 DDHD2O94830 711 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 TDP2O95551 362 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 ATP4AP20648 1035 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 SFPQP23246 707 aaKnown RBP eCLIP11.44□□□□□ -0.58
HOXD3-203ENST00000432796 FNTBP49356 437 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 RAB27AP51159 221 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 GPC3P51654 580 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 PSMC5P62195 406 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 SATB1Q01826 763 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 DSG1Q02413 1049 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 GNL2Q13823 731 aaKnown RBP11.44□□□□□ -0.58
HOXD3-203ENST00000432796 MTERF2Q49AM1 385 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 TWF2Q6IBS0 349 aaKnown RBP11.44□□□□□ -0.58
HOXD3-203ENST00000432796 TAS1R1Q7RTX1 841 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 PALB2Q86YC2 1186 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 SLFN12Q8IYM2 578 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 RNF168Q8IYW5 571 aaPredicted RBP11.44□□□□□ -0.58
HOXD3-203ENST00000432796 LINC01465Q8N7H1 131 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 URGCPQ8TCY9 931 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 DNASE1L2Q92874 299 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 GCOM2Q9BZD3 368 aaPredicted RBP11.44□□□□□ -0.58
HOXD3-203ENST00000432796 ARRDC1-AS1Q9H2J1 176 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 UNC45AQ9H3U1 944 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 NDRG2Q9UN36 371 aaKnown RBP11.44□□□□□ -0.58
HOXD3-203ENST00000432796 PPME1Q9Y570 386 aa11.44□□□□□ -0.58
HOXD3-203ENST00000432796 EVPLQ92817 2033 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 AKAP13Q12802 2813 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 TBX3O15119 743 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 ZNF623O75123 536 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 ECI2O75521 394 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 EFEMP2O95967 443 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 NTHL1P78549 312 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 LILRA6Q6PI73 481 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 PIK3AP1Q6ZUJ8 805 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 CEP68Q76N32 757 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 OTUD6AQ7L8S5 288 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 LRRC71Q8N4P6 559 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 SLC7A3Q8WY07 619 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 LENG9Q96B70 501 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 LOXL4Q96JB6 756 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 ZNF668Q96K58 619 aaPredicted RBP11.43□□□□□ -0.58
HOXD3-203ENST00000432796 SCNM1Q9BWG6 230 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.43□□□□□ -0.58
HOXD3-203ENST00000432796 FAM105AQ9NUU6 356 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 MARCH5Q9NX47 278 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 ANKFY1Q9P2R3 1169 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 KCNJ14Q9UNX9 436 aa11.43□□□□□ -0.58
HOXD3-203ENST00000432796 IGSF10Q6WRI0 2623 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms