RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 SNRPFP62306 86 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 FMO1Q01740 532 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 PRPF4BQ13523 1007 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 HSP90B2PQ58FF3 399 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 XKR3Q5GH77 459 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 MMS22LQ6ZRQ5 1243 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 ADAT2Q7Z6V5 191 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 NCAPG2Q86XI2 1143 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 DDX42Q86XP3 938 aaKnown RBP eCLIP16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.36■□□□□ 0.211e-8■□□□□ 8.6
SCAMP4-202ENST00000409472 FAM204AQ9H8W3 233 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 MAFBQ9Y5Q3 323 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 MCM3APO60318 1980 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 TTLL13PA6NNM8 815 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 TMEM110-MUSTN1A8MSY1 372 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 CES2O00748 559 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 GLRA2P23416 452 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 TNFRSF8P28908 595 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 ACOT2P49753 483 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 DHX37Q8IY37 1157 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 GPD1LQ8N335 351 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 SLC17A8Q8NDX2 589 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 PBKQ96KB5 322 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 BTBD6Q96KE9 485 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 COQ4Q9Y3A0 265 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 GSTTP1A0A1W2PQM5 241 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 GOLGA6BA6NDN3 693 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 FARP2O94887 1054 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 PGK2P07205 417 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 ECHS1P30084 290 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 GPC3P51654 580 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 MCCD1P59942 119 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 SEZ6Q53EL9 994 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 GLE1Q53GS7 698 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 EFCAB13Q8IY85 973 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 RASGEF1CQ8N431 466 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 FBXL13Q8NEE6 735 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 CHST13Q8NET6 341 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 KRT35Q92764 455 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 ISCUQ9H1K1 167 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 C17orf75Q9HAS0 396 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 MED4Q9NPJ6 270 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 RAB20Q9NX57 234 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 AMFRQ9UKV5 643 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 LRRIQ4A6NIV6 560 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 ICAM3P32942 547 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 TRIM50Q86XT4 487 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 SYCE1Q8N0S2 351 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 CEP120Q8N960 986 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 RUBCNQ92622 972 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 CELF4Q9BZC1 486 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 SPATC1LQ9H0A9 340 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 NEUROG2Q9H2A3 272 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 TXNRD2Q9NNW7 524 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 CTTNBP2NLQ9P2B4 639 aa16.35■□□□□ 0.21
SCAMP4-202ENST00000409472 KRIT1O00522 736 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 PMM2O15305 246 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 CNMDO75829 334 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 STAM2O75886 525 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 ATG7O95352 703 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 ARIH2O95376 493 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 FGGP02679 453 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 CYP11B1P15538 503 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 LIG4P49917 911 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 RTP1P59025 263 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 TNNC1P63316 161 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 BRDTQ58F21 947 aaPredicted RBP16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 TMEM63BQ5T3F8 832 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 SPOPLQ6IQ16 392 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 RIOX2Q8IUF8 465 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 DNERQ8NFT8 737 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 IFT74Q96LB3 600 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 DHX33Q9H6R0 707 aaKnown RBP16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 ERVK-5Q9HDB9 667 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 AMACRQ9UHK6 382 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 SART1O43290 800 aaKnown RBP16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 LY6KQ17RY6 165 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 EMBQ6PCB8 327 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 CRELD2Q6UXH1 353 aaPredicted RBP16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 IFT20Q8IY31 132 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 TMC2Q8TDI7 906 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 LMBR1Q8WVP7 490 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 CAVIN3Q969G5 261 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 FGD4Q96M96 766 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 ACBD3Q9H3P7 528 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 ANKFY1Q9P2R3 1169 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 DAAM1Q9Y4D1 1078 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 CSADQ9Y600 493 aa16.34■□□□□ 0.21
SCAMP4-202ENST00000409472 DKC1O60832 514 aaKnown RBP eCLIP16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 MFAP3P55082 362 aa16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 RPAINQ86UA6 219 aa16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 DDX1Q92499 740 aaKnown RBP16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 NT5C1BQ96P26 610 aa16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 TARS2Q9BW92 718 aaKnown RBP16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 FAM107BQ9H098 131 aa16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 PORCNQ9H237 461 aa16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 GARTP22102 1010 aa16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 EDNRBP24530 442 aa16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 MARK3P27448 753 aa16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 MAP2K2P36507 400 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms