RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 SCNN1GP51170 649 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 PLCB3Q01970 1234 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 UBE3AQ05086 875 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 POU5F1BQ06416 359 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 RAD51AP2Q09MP3 1159 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 RESTQ13127 1097 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 MAPK7Q13164 816 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 ADAM15Q13444 863 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 SF3A1Q15459 793 aaKnown RBP6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 CSPP1Q1MSJ5 1256 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 TMEM132AQ24JP5 1023 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 CTC1Q2NKJ3 1217 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 EEF1DP3Q658K8 133 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 CDCA2Q69YH5 1023 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 LLGL2Q6P1M3 1020 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 NOTUMQ6P988 496 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 TMC7Q7Z402 723 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 ZBTB8OSQ8IWT0 167 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 DAW1Q8N136 415 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 DEPTORQ8TB45 409 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 URGCPQ8TCY9 931 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 LRRC15Q8TF66 581 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 CCDC51Q96ER9 411 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 TMEM169Q96HH4 297 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 ZFP42Q96MM3 310 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 APOL5Q9BWW9 433 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 VN1R3Q9BXE9 311 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 NFKBIZQ9BYH8 718 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 TRIM6Q9C030 488 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 CCDC113Q9H0I3 377 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 CXCL16Q9H2A7 254 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 PDZD7Q9H5P4 517 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 MIOSQ9NXC5 875 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 KLK14Q9P0G3 267 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 CLEC1BQ9P126 229 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 DNM3Q9UQ16 869 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 PRG3Q9Y2Y8 225 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 CLIC4Q9Y696 253 aa6.37□□□□□ -1.39
HMGB1P20-201ENST00000402555 CNTNAP2Q9UHC6 1331 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 TRIOO75962 3097 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 NPHP3-ACAD11A0A0J9YXS1 232 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 A0A1B0GUA9 196 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 CCDC169A6NNP5 214 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 K7ELQ4 463 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 MBTPS2O43462 519 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 HIP1RO75146 1068 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 AVPP01185 164 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 MARCKSP29966 332 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 AXLP30530 894 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 CLCN1P35523 988 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 NAMPTP43490 491 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 PEX3P56589 373 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 CEBPZQ03701 1054 aaKnown RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 KRT17Q04695 432 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 NCBP1Q09161 790 aaKnown RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 PRPF4BQ13523 1007 aaKnown RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 DHX8Q14562 1220 aaKnown RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 KARSQ15046 597 aaKnown RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 PCBP1Q15365 356 aaKnown RBP eCLIP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 MAPK6Q16659 721 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 DUSP6Q16828 381 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 TMEM119Q4V9L6 283 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 SPECC1Q5M775 1068 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 NT5DC1Q5TFE4 455 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 FOXD4L5Q5VV16 416 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 ARL6IP4Q66PJ3 421 aaKnown RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 RINT1Q6NUQ1 792 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 SLC27A1Q6PCB7 646 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 C1orf186Q6ZWK4 172 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 USP49Q70CQ1 688 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 BRAPQ7Z569 592 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 CABP7Q86V35 215 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 FAM178BQ8IXR5 827 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 VPS52Q8N1B4 723 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 EFHBQ8N7U6 833 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 CNNM3Q8NE01 707 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 FOXD4L4Q8WXT5 416 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 RABGGTAQ92696 567 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 KIFAP3Q92845 792 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 PPP2R3CQ969Q6 453 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 IGSF21Q96ID5 467 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 CDK5RAP3Q96JB5 506 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 MSLNLQ96KJ4 702 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 IFT74Q96LB3 600 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 FAM193BQ96PV7 902 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 USB1Q9BQ65 265 aaKnown RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 C2orf40Q9H1Z8 148 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 FZD8Q9H461 694 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 PRMT7Q9NVM4 692 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 SNTG2Q9NY99 539 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 CACNG4Q9UBN1 327 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 PARP2Q9UGN5 583 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 PUF60Q9UHX1 559 aaKnown RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 CD207Q9UJ71 328 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 CDH22Q9UJ99 828 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 MTMR6Q9Y217 621 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 LZTS1Q9Y250 596 aa6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 TDRD15B5MCY1 1934 aaKnown RBP6.36□□□□□ -1.39
HMGB1P20-201ENST00000402555 MYH11P35749 1972 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 TRIP11Q15643 1979 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms