RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 MYCP01106 439 aaPredicted RBP15.01□□□□□ -0.01
SCAF4-202ENST00000399804 NAMPTP43490 491 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 AP3M2P53677 418 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 MRPS9P82933 396 aaKnown RBP15.01□□□□□ -0.01
SCAF4-202ENST00000399804 GLE1Q53GS7 698 aaKnown RBP15.01□□□□□ -0.01
SCAF4-202ENST00000399804 PROCA1Q8NCQ7 364 aaPredicted RBP15.01□□□□□ -0.01
SCAF4-202ENST00000399804 CASZ1Q86V15 1759 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 DLK2Q6UY11 383 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 NOC2LQ9Y3T9 749 aaKnown RBP15.01□□□□□ -0.01
SCAF4-202ENST00000399804 TAF1P21675 1872 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 UBR2Q8IWV8 1755 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 PEX10O60683 326 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 NOP14P78316 857 aaKnown RBP15.01□□□□□ -0.01
SCAF4-202ENST00000399804 MYBPC2Q14324 1141 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 CAPN12Q6ZSI9 719 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 USP50Q70EL3 339 aaPredicted RBP15.01□□□□□ -0.01
SCAF4-202ENST00000399804 SV2AQ7L0J3 742 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 KIF12Q96FN5 646 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 SNX24Q9Y343 169 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 BTAF1O14981 1849 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 NWD2Q9ULI1 1742 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 CICQ96RK0 1608 aaPredicted RBP15□□□□□ -0.01
SCAF4-202ENST00000399804 RGS16O15492 202 aaPredicted RBP15□□□□□ -0.01
SCAF4-202ENST00000399804 ASAP2O43150 1006 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 GNAT1P11488 350 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 PBX1P40424 430 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 IFRD2Q12894 506 aaPredicted RBP15□□□□□ -0.01
SCAF4-202ENST00000399804 MEA1Q16626 185 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 EMBQ6PCB8 327 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 CEP128Q6ZU80 1094 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 KCTD10Q9H3F6 313 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 TJP1Q07157 1748 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 GTPBP10A4D1E9 387 aaKnown RBP15□□□□□ -0.01
SCAF4-202ENST00000399804 PDHXO00330 501 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 TREML2Q5T2D2 321 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 CCDC91Q7Z6B0 441 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 VPS37BQ9H9H4 285 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 EHD2Q9NZN4 543 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 PCDHB2Q9Y5E7 798 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 SYNGAP1Q96PV0 1343 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 ATMINO43313 823 aaPredicted RBP15□□□□□ -0.01
SCAF4-202ENST00000399804 RNF40O75150 1001 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 CSDE1O75534 798 aaKnown RBP15□□□□□ -0.01
SCAF4-202ENST00000399804 MAPTP10636 758 aaKnown RBP15□□□□□ -0.01
SCAF4-202ENST00000399804 GARTP22102 1010 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 WDR59Q6PJI9 974 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 RIOX2Q8IUF8 465 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 RNPC3Q96LT9 517 aaKnown RBP15□□□□□ -0.01
SCAF4-202ENST00000399804 ACAP3Q96P50 834 aa15□□□□□ -0.01
SCAF4-202ENST00000399804 ZCCHC17Q9NP64 241 aaKnown RBP15□□□□□ -0.01
SCAF4-202ENST00000399804 F8VZ95 297 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 PSMA2P25787 234 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 NLRP11P59045 1033 aaKnown RBP14.99□□□□□ -0.01
SCAF4-202ENST00000399804 KCNMA1Q12791 1236 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 TAF12Q16514 161 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 MAP7D3Q8IWC1 876 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 RBBP8NLQ8NC74 664 aaPredicted RBP14.99□□□□□ -0.01
SCAF4-202ENST00000399804 RNF25Q96BH1 459 aaPredicted RBP14.99□□□□□ -0.01
SCAF4-202ENST00000399804 SYT17Q9BSW7 474 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 BEGAINQ9BUH8 593 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 AMACRQ9UHK6 382 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 AGAP1Q9UPQ3 857 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 ASTN1O14525 1302 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 WEE2P0C1S8 567 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 C6orf222P0C671 652 aaPredicted RBP14.99□□□□□ -0.01
SCAF4-202ENST00000399804 TMEM253P0C7T8 217 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 UBA1P22314 1058 aaKnown RBP14.99□□□□□ -0.01
SCAF4-202ENST00000399804 GCLCP48506 637 aaPredicted RBP14.99□□□□□ -0.01
SCAF4-202ENST00000399804 UGCGQ16739 394 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 AFG1LQ8WV93 481 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 CLEC4DQ8WXI8 215 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 ELMO3Q96BJ8 720 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 NGRNQ9NPE2 291 aaKnown RBP14.99□□□□□ -0.01
SCAF4-202ENST00000399804 NKIRAS1Q9NYS0 192 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 AIPL1Q9NZN9 384 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 DIS3Q9Y2L1 958 aaKnown RBP14.99□□□□□ -0.01
SCAF4-202ENST00000399804 TFRCP02786 760 aaKnown RBP14.99□□□□□ -0.01
SCAF4-202ENST00000399804 CDO1Q16878 200 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 CBWD6Q4V339 395 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 COBLL1Q53SF7 1204 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 CBWD3Q5JTY5 395 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 CBWD5Q5RIA9 395 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 RFX6Q8HWS3 928 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 FMO2Q99518 471 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 ZWILCHQ9H900 591 aa14.99□□□□□ -0.01
SCAF4-202ENST00000399804 H7C0C1 242 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 SGK1O00141 431 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 FZD9O00144 591 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 SGPL1O95470 568 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 VIMP08670 466 aaKnown RBP14.98□□□□□ -0.01
SCAF4-202ENST00000399804 ATP5OP48047 213 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 TRIM72Q6ZMU5 477 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 CROCCP2Q86T23 111 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 SPIRE2Q8WWL2 714 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 TMEM117Q9H0C3 514 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 THAP2Q9H0W7 228 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 RBM12Q9NTZ6 932 aaKnown RBP14.98□□□□□ -0.01
SCAF4-202ENST00000399804 PRMT7Q9NVM4 692 aaPredicted RBP14.98□□□□□ -0.01
SCAF4-202ENST00000399804 XIRP1Q702N8 1843 aaKnown RBP14.98□□□□□ -0.01
SCAF4-202ENST00000399804 GRID2IPA4D2P6 1211 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms