RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 YARSP54577 528 aaKnown RBP15.11■□□□□ 0.01
CXCL12-205ENST00000395794 STRN3Q13033 797 aa15.11■□□□□ 0.01
CXCL12-205ENST00000395794 TUSC3Q13454 348 aa15.11■□□□□ 0.01
CXCL12-205ENST00000395794 ATAT1Q5SQI0 421 aa15.11■□□□□ 0.01
CXCL12-205ENST00000395794 RARS2Q5T160 578 aaKnown RBP15.11■□□□□ 0.01
CXCL12-205ENST00000395794 KCNK18Q7Z418 384 aa15.11■□□□□ 0.01
CXCL12-205ENST00000395794 SYT2Q8N9I0 419 aaPredicted RBP15.11■□□□□ 0.01
CXCL12-205ENST00000395794 GSTCDQ8NEC7 633 aa15.11■□□□□ 0.01
CXCL12-205ENST00000395794 SLC22A17Q8WUG5 538 aa15.11■□□□□ 0.01
CXCL12-205ENST00000395794 KLHL5Q96PQ7 755 aa15.11■□□□□ 0.01
CXCL12-205ENST00000395794 PNMA5Q96PV4 448 aa15.11■□□□□ 0.01
CXCL12-205ENST00000395794 LRFN3Q9BTN0 628 aa15.11■□□□□ 0.01
CXCL12-205ENST00000395794 MARCH5Q9NX47 278 aa15.11■□□□□ 0.01
CXCL12-205ENST00000395794 TNFSF13BQ9Y275 285 aa15.11■□□□□ 0.01
CXCL12-205ENST00000395794 NR2E1Q9Y466 385 aa15.11■□□□□ 0.01
CXCL12-205ENST00000395794 CNPP09543 421 aaKnown RBP15.1■□□□□ 0.01
CXCL12-205ENST00000395794 LONP1P36776 959 aaKnown RBP15.1■□□□□ 0.01
CXCL12-205ENST00000395794 CREMQ03060 361 aa15.1■□□□□ 0.01
CXCL12-205ENST00000395794 RAD51AP2Q09MP3 1159 aa15.1■□□□□ 0.01
CXCL12-205ENST00000395794 HSP90AA2PQ14568 343 aaPredicted RBP15.1■□□□□ 0.01
CXCL12-205ENST00000395794 SF3A1Q15459 793 aaKnown RBP15.1■□□□□ 0.01
CXCL12-205ENST00000395794 USP41Q3LFD5 358 aa15.1■□□□□ 0.01
CXCL12-205ENST00000395794 NT5DC1Q5TFE4 455 aa15.1■□□□□ 0.01
CXCL12-205ENST00000395794 EEF1DP3Q658K8 133 aa15.1■□□□□ 0.01
CXCL12-205ENST00000395794 FUT10Q6P4F1 479 aa15.1■□□□□ 0.01
CXCL12-205ENST00000395794 DAW1Q8N136 415 aa15.1■□□□□ 0.01
CXCL12-205ENST00000395794 INTS4Q96HW7 963 aaKnown RBP15.1■□□□□ 0.01
CXCL12-205ENST00000395794 FBXL18Q96ME1 805 aa15.1■□□□□ 0.01
CXCL12-205ENST00000395794 CCDC94Q9BW85 323 aaPredicted RBP15.1■□□□□ 0.01
CXCL12-205ENST00000395794 SFXN1Q9H9B4 322 aa15.1■□□□□ 0.01
CXCL12-205ENST00000395794 TSHZ2Q9NRE2 1034 aa15.1■□□□□ 0.01
CXCL12-205ENST00000395794 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.1■□□□□ 0.01
CXCL12-205ENST00000395794 TOPORSQ9NS56 1045 aaPredicted RBP15.1■□□□□ 0.01
CXCL12-205ENST00000395794 MUTYHQ9UIF7 546 aa15.1■□□□□ 0.01
CXCL12-205ENST00000395794 ADAM28Q9UKQ2 775 aa15.1■□□□□ 0.01
CXCL12-205ENST00000395794 HCN4Q9Y3Q4 1203 aa15.1■□□□□ 0.01
CXCL12-205ENST00000395794 SF3B1O75533 1304 aaKnown RBP eCLIP15.1■□□□□ 0.01
CXCL12-205ENST00000395794 SFI1A8K8P3 1242 aa15.09■□□□□ 0.01
CXCL12-205ENST00000395794 PRR33A8MZF0 331 aa15.09■□□□□ 0.01
CXCL12-205ENST00000395794 H0YCG3 227 aa15.09■□□□□ 0.01
CXCL12-205ENST00000395794 SLC16A4O15374 487 aa15.09■□□□□ 0.01
CXCL12-205ENST00000395794 KRT18P05783 430 aaKnown RBP15.09■□□□□ 0.01
CXCL12-205ENST00000395794 PLS3P13797 630 aa15.09■□□□□ 0.01
CXCL12-205ENST00000395794 CLCN4P51793 760 aa15.09■□□□□ 0.01
CXCL12-205ENST00000395794 DSG1Q02413 1049 aa15.09■□□□□ 0.01
CXCL12-205ENST00000395794 ZNF568Q3ZCX4 644 aa15.09■□□□□ 0.01
CXCL12-205ENST00000395794 TMEM119Q4V9L6 283 aa15.09■□□□□ 0.01
CXCL12-205ENST00000395794 HERC4Q5GLZ8 1057 aaPredicted RBP15.09■□□□□ 0.01
CXCL12-205ENST00000395794 TAS1R1Q7RTX1 841 aa15.09■□□□□ 0.01
CXCL12-205ENST00000395794 C12orf76Q8N812 135 aaPredicted RBP15.09■□□□□ 0.01
CXCL12-205ENST00000395794 SPIRE2Q8WWL2 714 aa15.09■□□□□ 0.01
CXCL12-205ENST00000395794 ACO2Q99798 780 aaKnown RBP15.09■□□□□ 0.01
CXCL12-205ENST00000395794 NTPCRQ9BSD7 190 aaKnown RBP15.09■□□□□ 0.01
CXCL12-205ENST00000395794 LARSQ9P2J5 1176 aaKnown RBP15.09■□□□□ 0.01
CXCL12-205ENST00000395794 ARHGAP28Q9P2N2 729 aa15.09■□□□□ 0.01
CXCL12-205ENST00000395794 CASTOR2A6NHX0 329 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 PTGESO14684 152 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 TEX28O15482 410 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 LILRB3O75022 631 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 EDN1P05305 212 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 SYT1P21579 422 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 SLC12A3P55017 1021 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 ELAVL2Q12926 359 aaKnown RBP15.08■□□□□ 0
CXCL12-205ENST00000395794 MAPK7Q13164 816 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 DHX8Q14562 1220 aaKnown RBP15.08■□□□□ 0
CXCL12-205ENST00000395794 KIAA0319Q5VV43 1072 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 TMC5Q6UXY8 1006 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 ZBTB33Q86T24 672 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 GPR65Q8IYL9 337 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 RIN2Q8WYP3 895 aaPredicted RBP15.08■□□□□ 0
CXCL12-205ENST00000395794 RABGGTAQ92696 567 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 TARS2Q9BW92 718 aaKnown RBP15.08■□□□□ 0
CXCL12-205ENST00000395794 CHST7Q9NS84 486 aa15.08■□□□□ 0
CXCL12-205ENST00000395794 F8W810 466 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 K7ELQ4 463 aaPredicted RBP15.07■□□□□ 0
CXCL12-205ENST00000395794 GLUD1P00367 558 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 MCF2P10911 925 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 SCP2P22307 547 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 SP100P23497 879 aaPredicted RBP15.07■□□□□ 0
CXCL12-205ENST00000395794 GRM5P41594 1212 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 MATR3P43243 847 aaKnown RBP eCLIP15.07■□□□□ 0
CXCL12-205ENST00000395794 MPZL3Q6UWV2 235 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 GPBP1Q86WP2 473 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 RNF168Q8IYW5 571 aaPredicted RBP15.07■□□□□ 0
CXCL12-205ENST00000395794 EDAQ92838 391 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 UROC1Q96N76 676 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 ACAP3Q96P50 834 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 GPR62Q9BZJ7 368 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 CDT1Q9H211 546 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 POMKQ9H5K3 350 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 RXFP1Q9HBX9 757 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 C11orf16Q9NQ32 467 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 ODF2LQ9ULJ1 636 aa15.07■□□□□ 0
CXCL12-205ENST00000395794 TOM1L1O75674 476 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 FAM13AO94988 1023 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 EFEMP2O95967 443 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 C1RP00736 705 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 WEE2P0C1S8 567 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 HARSP12081 509 aaKnown RBP15.06■□□□□ 0
CXCL12-205ENST00000395794 TXLNAP40222 546 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms