RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 NME3Q13232 169 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 TMEM132DQ14C87 1099 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 CDKL2Q92772 493 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 ELMO3Q96BJ8 720 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 RBM41Q96IZ5 413 aaKnown RBP19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 SCYL1Q96KG9 808 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 PDGFDQ9GZP0 370 aaPredicted RBP19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 SIK2Q9H0K1 926 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 SLC12A6Q9UHW9 1150 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 RTN2O75298 545 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 GTF2A2P52657 109 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 APBA1Q02410 837 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 EMBQ6PCB8 327 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 CACNA2D3Q8IZS8 1091 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 PYROXD1Q8WU10 500 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 A1CFQ9NQ94 594 aaKnown RBP19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 LCP1P13796 627 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 RARRES1P49788 294 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 SMAD1Q15797 465 aaKnown RBP19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 FKBP1CQ5VVH2 108 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 GLIS3Q8NEA6 775 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 SLITRK6Q9H5Y7 841 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 KRT3P12035 628 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 DGKDQ16760 1214 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 KIZQ2M2Z5 673 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 TRIM65Q6PJ69 517 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 THEM5Q8N1Q8 247 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 RYBPQ8N488 228 aaPredicted RBP19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 AFG1LQ8WV93 481 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 MKL1Q969V6 931 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 C18orf8Q96DM3 657 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 DHX35Q9H5Z1 703 aaKnown RBP19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 TMEM8AQ9HCN3 771 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 HAUS2Q9NVX0 235 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 ATP8B1O43520 1251 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 VSNL1P62760 191 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 ARHGEF2Q92974 986 aaKnown RBP19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 MRIQ9BWK5 157 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 KLK14Q9P0G3 267 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 AFG3L2Q9Y4W6 797 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 MOCS2O96007 188 aaPredicted RBP19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 SGSM1Q2NKQ1 1148 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 GKAP1Q5VSY0 366 aaPredicted RBP19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 SDCCAG8Q86SQ7 713 aaPredicted RBP19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 RHOT1Q8IXI2 618 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 DCLK2Q8N568 766 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 SAYSD1Q9NPB0 183 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 SLC26A4O43511 780 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 MSH2P43246 934 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 RBP5P82980 135 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 CACNB2Q08289 660 aaPredicted RBP19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 VGLL4Q14135 290 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 ARL13BQ3SXY8 428 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 RDM1Q8NG50 284 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 GPRC5DQ9NZD1 345 aa19.11■□□□□ 0.65
PTPDC1-202ENST00000375360 WDR91A4D1P6 747 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 PODXLO00592 558 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 MEIS2O14770 477 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 AP3M2P53677 418 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 FKBP1AP62942 108 aaKnown RBP19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 TSPY1Q01534 308 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 SLMAPQ14BN4 828 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 ZC3H18Q86VM9 953 aaKnown RBP19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 ASCC2Q9H1I8 757 aaPredicted RBP19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 IRF6O14896 467 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 TADA3O75528 432 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 VTNP04004 478 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 PON1P27169 355 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 SARSP49591 514 aaKnown RBP19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 CDH6P55285 790 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 TFDP2Q14188 446 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 NAB2Q15742 525 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 CCDC137Q6PK04 289 aaKnown RBP19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 TRPM4Q8TD43 1214 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 RRAGCQ9HB90 399 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 PRMT7Q9NVM4 692 aaPredicted RBP19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 KLHL14Q9P2G3 628 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 PLAAQ9Y263 795 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 KIAA0391O15091 583 aaKnown RBP19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 PRPSAP1Q14558 356 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 CDKAL1Q5VV42 579 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 GSDMBQ8TAX9 411 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 ZBBXA8MT70 800 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 ORC1Q13415 861 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 CUL1Q13616 776 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 MCUR1Q96AQ8 359 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 FAF2Q96CS3 445 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 CDCA5Q96FF9 252 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 CFAP36Q96G28 342 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 FAM118BQ9BPY3 351 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 LACRTQ9GZZ8 138 aa19.1■□□□□ 0.65
PTPDC1-202ENST00000375360 ASAP2O43150 1006 aa19.09■□□□□ 0.65
PTPDC1-202ENST00000375360 EXTL3O43909 919 aa19.09■□□□□ 0.65
PTPDC1-202ENST00000375360 TROVE2P10155 538 aaKnown RBP eCLIP19.09■□□□□ 0.65
PTPDC1-202ENST00000375360 KCNA1Q09470 495 aa19.09■□□□□ 0.65
PTPDC1-202ENST00000375360 TRIM72Q6ZMU5 477 aa19.09■□□□□ 0.65
PTPDC1-202ENST00000375360 RAPH1Q70E73 1250 aa19.09■□□□□ 0.65
PTPDC1-202ENST00000375360 TRAPPC12Q8WVT3 735 aa19.09■□□□□ 0.65
PTPDC1-202ENST00000375360 TMEM117Q9H0C3 514 aa19.09■□□□□ 0.65
PTPDC1-202ENST00000375360 CCDC68Q9H2F9 335 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms