RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 LLGL2Q6P1M3 1020 aa17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 PCYT2Q99447 389 aa17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 ISCUQ9H1K1 167 aa17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 ZNF233A6NK53 670 aa17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 DAPK3O43293 454 aa17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 TNFRSF8P28908 595 aa17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 GPC3P51654 580 aa17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 BIRC3Q13489 604 aa17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 WDR78Q5VTH9 848 aa17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 TTC19Q6DKK2 380 aaPredicted RBP17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 RASGEF1CQ8N431 466 aa17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 CAVIN3Q969G5 261 aa17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 HVCN1Q96D96 273 aa17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 C17orf75Q9HAS0 396 aa17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 MAFBQ9Y5Q3 323 aaPredicted RBP17.2■□□□□ 0.34
CNKSR1-202ENST00000374253 GSTTP1A0A1W2PQM5 241 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 GOLGA6CA6NDK9 693 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 HSF2BPO75031 334 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 RTN2O75298 545 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 GOLGA6DP0CG33 693 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 COMTP21964 271 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 FLT3P36888 993 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 PDE6CP51160 858 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 STRN3Q13033 797 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 SULF1Q8IWU6 871 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 SH2D3CQ8N5H7 860 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 GOLGA6L1Q8N7Z2 621 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 DEPTORQ8TB45 409 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 RUBCNQ92622 972 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 ZNF653Q96CK0 615 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 ZBTB10Q96DT7 871 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 RUFY1Q96T51 708 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 SPATC1LQ9H0A9 340 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 RABEP2Q9H5N1 569 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 GOLGA6AQ9NYA3 693 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 FBXO40Q9UH90 709 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 ECHS1P30084 290 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 IRX3P78415 501 aaPredicted RBP17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 MKRN4PQ13434 485 aaPredicted RBP17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 TTLL12Q14166 644 aaPredicted RBP17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 SH3D19Q5HYK7 790 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 TMEM63BQ5T3F8 832 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 FMNL3Q8IVF7 1028 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 CHST13Q8NET6 341 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 SLC7A3Q8WY07 619 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 FNBP1Q96RU3 617 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 NUP85Q9BW27 656 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 AGO2Q9UKV8 859 aaKnown RBP17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 COQ4Q9Y3A0 265 aa17.19■□□□□ 0.34
CNKSR1-202ENST00000374253 K7ERI5 159 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 FARP2O94887 1054 aaPredicted RBP17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 GGPS1O95749 300 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 TTMPQ5BVD1 217 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 RHOT2Q8IXI1 618 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 TMC2Q8TDI7 906 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 GLG1Q92896 1179 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 DCPSQ96C86 337 aaKnown RBP17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 TAF1DQ9H5J8 278 aaPredicted RBP17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 TXNRD2Q9NNW7 524 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 PPP2R3BQ9Y5P8 575 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 WDR90Q96KV7 1748 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 ATP8B3O60423 1300 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 ARIH2O95376 493 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 TDRD10Q5VZ19 366 aaKnown RBP17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 DNERQ8NFT8 737 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 TRIM7Q9C029 511 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 PORCNQ9H237 461 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 RNF181Q9P0P0 153 aa17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 ZNFX1Q9P2E3 1918 aaKnown RBP17.18■□□□□ 0.34
CNKSR1-202ENST00000374253 STAM2O75886 525 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 GARTP22102 1010 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 TCF7P36402 384 aaPredicted RBP17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 CFAP58Q5T655 872 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 DAB2IPQ5VWQ8 1189 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 FOXR1Q6PIV2 292 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 CRELD2Q6UXH1 353 aaPredicted RBP17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 ZBTB33Q86T24 672 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 OR2W6PQ8NHA6 318 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 ZNF564Q8TBZ8 553 aaPredicted RBP17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 CPA5Q8WXQ8 436 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 PIK3R5Q8WYR1 880 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 DHX33Q9H6R0 707 aaKnown RBP17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 TRPC6Q9Y210 931 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 EXTL3O43909 919 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 HLA-DRAP01903 254 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 CFHP08603 1231 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 PIK3CAP42336 1068 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 CDR2Q01850 454 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 ZSCAN26Q16670 478 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 PASD1Q8IV76 773 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 LRRC71Q8N4P6 559 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 DDX1Q92499 740 aaKnown RBP17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 CALR3Q96L12 384 aaKnown RBP17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 MSTO1Q9BUK6 570 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 ASCC2Q9H1I8 757 aaPredicted RBP17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 C1orf112Q9NSG2 853 aa17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 RBAKQ9NYW8 714 aaPredicted RBP17.17■□□□□ 0.34
CNKSR1-202ENST00000374253 PTPRFP10586 1907 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 TCRBV7S2A1N4TA0A589 114 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 PMM2O15305 246 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms