RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 NEU2Q9Y3R4 380 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 ABCB11O95342 1321 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 OATP04181 439 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 COMTP21964 271 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 KLHDC7AQ5VTJ3 777 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 PABPC3Q9H361 631 aaKnown RBP16.87■□□□□ 0.29
COL17A1-202ENST00000369733 ATP6V0A4Q9HBG4 840 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 KLHL11Q9NVR0 708 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 GH2P01242 217 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 PDHBP11177 359 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 TAC1P20366 129 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 CDK17Q00537 523 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 RCSD1Q6JBY9 416 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 KDM4CQ9H3R0 1056 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 WARS2Q9UGM6 360 aaKnown RBP16.86■□□□□ 0.29
COL17A1-202ENST00000369733 ZNF711Q9Y462 761 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 ALG6Q9Y672 507 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 LMTK3Q96Q04 1460 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 SRGAP2CP0DJJ0 459 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 INPP1P49441 399 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 GTSE1Q9NYZ3 720 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 ANGPTL3Q9Y5C1 460 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 TBX2Q13207 712 aaPredicted RBP16.86■□□□□ 0.29
COL17A1-202ENST00000369733 INPP5FQ9Y2H2 1132 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 SETD1BQ9UPS6 1966 aaKnown RBP16.86■□□□□ 0.29
COL17A1-202ENST00000369733 PTPRMP28827 1452 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 P4HBP07237 508 aaKnown RBP16.86■□□□□ 0.29
COL17A1-202ENST00000369733 MYBP10242 640 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 ITGA8P53708 1063 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 DAB2IPQ5VWQ8 1189 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 RYBPQ8N488 228 aaPredicted RBP16.86■□□□□ 0.29
COL17A1-202ENST00000369733 MCPH1Q8NEM0 835 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 NSUN4Q96CB9 384 aaKnown RBP16.86■□□□□ 0.29
COL17A1-202ENST00000369733 GOLGA8CPA6NN73 597 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 SSTR3P32745 418 aaPredicted RBP16.86■□□□□ 0.29
COL17A1-202ENST00000369733 KCNJ1P48048 391 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 SERPINB4P48594 390 aa16.86■□□□□ 0.29
COL17A1-202ENST00000369733 GCOM2Q9BZD3 368 aaPredicted RBP16.86■□□□□ 0.29
COL17A1-202ENST00000369733 RNF103-CHMP3A0A140T963 221 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 XPOTO43592 962 aaKnown RBP16.85■□□□□ 0.29
COL17A1-202ENST00000369733 UBTFL6P0CB48 400 aaPredicted RBP16.85■□□□□ 0.29
COL17A1-202ENST00000369733 CTCFP49711 727 aaPredicted RBP16.85■□□□□ 0.29
COL17A1-202ENST00000369733 MYLK4Q86YV6 388 aaPredicted RBP16.85■□□□□ 0.29
COL17A1-202ENST00000369733 EXOC8Q8IYI6 725 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 LRRC4Q9HBW1 653 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 PSMC1P62191 440 aaKnown RBP16.85■□□□□ 0.29
COL17A1-202ENST00000369733 CNGA3Q16281 694 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 ZNF699Q32M78 642 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 CYFIP1Q7L576 1253 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 RGL1Q9NZL6 768 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 TARSP26639 723 aaKnown RBP16.85■□□□□ 0.29
COL17A1-202ENST00000369733 VHLP40337 213 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 CNPY4Q8N129 248 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 RNF169Q8NCN4 708 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 CATSPER1Q8NEC5 780 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 EPS8L3Q8TE67 593 aaKnown RBP16.85■□□□□ 0.29
COL17A1-202ENST00000369733 ALKBH8Q96BT7 664 aaKnown RBP16.85■□□□□ 0.29
COL17A1-202ENST00000369733 SERPINB12Q96P63 405 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 ING2Q9H160 280 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 A0A087X0T9 212 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 FAM228BP0C875 321 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 CYP19A1P11511 503 aaPredicted RBP16.85■□□□□ 0.29
COL17A1-202ENST00000369733 POLD1P28340 1107 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 MAGEA4P43358 317 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 MORF4L2Q15014 288 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 NBPF20Q3BBV1 942 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 PLEKHG2Q9H7P9 1386 aa16.85■□□□□ 0.29
COL17A1-202ENST00000369733 SPDYE16A6NNV3 312 aaPredicted RBP16.84■□□□□ 0.29
COL17A1-202ENST00000369733 MAP2K7O14733 419 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 COILP38432 576 aaPredicted RBP16.84■□□□□ 0.29
COL17A1-202ENST00000369733 QARSP47897 775 aaKnown RBP16.84■□□□□ 0.29
COL17A1-202ENST00000369733 SPDYE2Q495Y8 402 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 THNSL1Q8IYQ7 743 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 RCOR2Q8IZ40 523 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 ABL1P00519 1130 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 GLI1P08151 1106 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 FIGNQ5HY92 759 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 EXT2Q93063 718 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 ACAP3Q96P50 834 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 THTPAQ9BU02 230 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 COA1Q9GZY4 146 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 KLHL8Q9P2G9 620 aaPredicted RBP16.84■□□□□ 0.29
COL17A1-202ENST00000369733 MTO1Q9Y2Z2 717 aaKnown RBP16.84■□□□□ 0.29
COL17A1-202ENST00000369733 LRRIQ1Q96JM4 1722 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 CACNB3P54284 484 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 CYTH1Q15438 398 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 LVRNQ6Q4G3 990 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 SUGP1Q8IWZ8 645 aaKnown RBP16.84■□□□□ 0.29
COL17A1-202ENST00000369733 SIX6OS1Q8N1H7 587 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 CCNYL1Q8N7R7 359 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 FAM129AQ9BZQ8 928 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 KIF9Q9HAQ2 790 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 TBC1D22BQ9NU19 505 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 CAND2O75155 1236 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 HAUS6Q7Z4H7 955 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 DHX38Q92620 1227 aaKnown RBP16.84■□□□□ 0.29
COL17A1-202ENST00000369733 ZMAT2Q96NC0 199 aaKnown RBP16.84■□□□□ 0.29
COL17A1-202ENST00000369733 CPS1P31327 1500 aa16.84■□□□□ 0.29
COL17A1-202ENST00000369733 F5H423 210 aaPredicted RBP16.83■□□□□ 0.29
COL17A1-202ENST00000369733 ASAP2O43150 1006 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms