RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 TMEM260Q9NX78 707 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 BIN2Q9UBW5 565 aaPredicted RBP8.1□□□□□ -1.11
C11orf54-202ENST00000354421 SEC63Q9UGP8 760 aaKnown RBP8.1□□□□□ -1.11
C11orf54-202ENST00000354421 CNOT7Q9UIV1 285 aaKnown RBP8.1□□□□□ -1.11
C11orf54-202ENST00000354421 AMFRQ9UKV5 643 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 C15orf41Q9Y2V0 281 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 MYH4Q9Y623 1939 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 KDM3AQ9Y4C1 1321 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 FRMD3A2A2Y4 597 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 SLC37A4O43826 429 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 ATP2C2O75185 946 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 OAS1P00973 400 aaKnown RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 UCHL3P15374 230 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 NQO1P15559 274 aaKnown RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 PAX7P23759 505 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 HIBADHP31937 336 aaKnown RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 NOVP48745 357 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 PMS2P54278 862 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 JAM2P57087 298 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 SRSF11Q05519 484 aaKnown RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 KLRC3Q07444 240 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 GRIK3Q13003 919 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 DHX34Q14147 1143 aaKnown RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 ZKSCAN8Q15776 578 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 ECM1Q16610 540 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 GALNTL6Q49A17 601 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 ACCSLQ4AC99 568 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 TNFAIP8L3Q5GJ75 292 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 TRPM8Q7Z2W7 1104 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 VPS36Q86VN1 386 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 LRRC34Q8IZ02 419 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 PROCA1Q8NCQ7 364 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 STAMBPL1Q96FJ0 436 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 NAP1L3Q99457 506 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 ERP44Q9BS26 406 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 NT5C3AQ9H0P0 336 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 DPH5Q9H2P9 285 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 LRRC4CQ9HCJ2 640 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 SIX2Q9NPC8 291 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 ENAMQ9NRM1 1142 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 SAMD15Q9P1V8 674 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 LIMD1Q9UGP4 676 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 SRP68Q9UHB9 627 aaKnown RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 BAIAP2L1Q9UHR4 511 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 NIP7Q9Y221 180 aaKnown RBP eCLIP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 SNED1Q8TER0 1413 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 DDX3XO00571 662 aaKnown RBP eCLIP8.09□□□□□ -1.119e-8■■■□□ 15.2
C11orf54-202ENST00000354421 BUB1BO60566 1050 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 TDP2O95551 362 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 AFPP02771 609 aaKnown RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 SHBGP04278 402 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 TMEM253P0C7T8 217 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 GOLGA8HP0CJ92 632 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 ACTN1P12814 892 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 FERP16591 822 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 PON1P27169 355 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 PRDX5P30044 214 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 GBP1P32455 592 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 CRKLP46109 303 aaKnown RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 ADCY7P51828 1080 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 EIF6P56537 245 aaKnown RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 PPATQ06203 517 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 ADCY2Q08462 1091 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 ADAM9Q13443 819 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 NAA25Q14CX7 972 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 EPHA7Q15375 998 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 ENOX2Q16206 610 aaKnown RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 NEDD1Q8NHV4 660 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 SLC30A5Q8TAD4 765 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 OLIG1Q8TAK6 271 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 NEK9Q8TD19 979 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 SCFD1Q8WVM8 642 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 SPAG5Q96R06 1193 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 PIGSQ96S52 555 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 KCTD15Q96SI1 283 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 ARHGAP9Q9BRR9 750 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 TRIM51Q9BSJ1 452 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 MXD3Q9BW11 206 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 FGFBP2Q9BYJ0 223 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 CELF4Q9BZC1 486 aaKnown RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 STMN4Q9H169 189 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-202ENST00000354421 KCNH6Q9H252 994 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 GOLPH3Q9H4A6 298 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 TRAF3IP3Q9Y228 551 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 ATP8A1Q9Y2Q0 1164 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 DAAM1Q9Y4D1 1078 aa8.09□□□□□ -1.11
C11orf54-202ENST00000354421 NAV1Q8NEY1 1877 aa8.08□□□□□ -1.12
C11orf54-202ENST00000354421 LIN7AO14910 233 aaPredicted RBP8.08□□□□□ -1.12
C11orf54-202ENST00000354421 KIAA0391O15091 583 aaKnown RBP8.08□□□□□ -1.12
C11orf54-202ENST00000354421 RGS16O15492 202 aaPredicted RBP8.08□□□□□ -1.12
C11orf54-202ENST00000354421 PPP1R12BO60237 982 aaPredicted RBP8.08□□□□□ -1.12
C11orf54-202ENST00000354421 ANP32DO95626 131 aa8.08□□□□□ -1.12
C11orf54-202ENST00000354421 ALAS1P13196 640 aa8.08□□□□□ -1.12
C11orf54-202ENST00000354421 CYP11B2P19099 503 aa8.08□□□□□ -1.12
C11orf54-202ENST00000354421 SLC9A1P19634 815 aa8.08□□□□□ -1.12
C11orf54-202ENST00000354421 ZNF131P52739 623 aa8.08□□□□□ -1.12
C11orf54-202ENST00000354421 NCALDP61601 193 aa8.08□□□□□ -1.12
C11orf54-202ENST00000354421 GSTO1P78417 241 aa8.08□□□□□ -1.12
C11orf54-202ENST00000354421 DR1Q01658 176 aa8.08□□□□□ -1.12
C11orf54-202ENST00000354421 EXOC3L4Q17RC7 722 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms