RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 SHROOM1Q2M3G4 852 aaPredicted RBP19.03■□□□□ 0.64
APP-202ENST00000348990 EPC2Q52LR7 807 aa19.03■□□□□ 0.64
APP-202ENST00000348990 GRAPLQ8TC17 118 aaPredicted RBP19.03■□□□□ 0.64
APP-202ENST00000348990 SH3GL3Q99963 347 aa19.03■□□□□ 0.64
APP-202ENST00000348990 GPR88Q9GZN0 384 aa19.03■□□□□ 0.64
APP-202ENST00000348990 MAPK13O15264 365 aa19.02■□□□□ 0.64
APP-202ENST00000348990 GJB6O95452 261 aa19.02■□□□□ 0.64
APP-202ENST00000348990 EPHB2P29323 1055 aa19.02■□□□□ 0.64
APP-202ENST00000348990 MGAT5Q09328 741 aa19.02■□□□□ 0.64
APP-202ENST00000348990 GRIK3Q13003 919 aa19.02■□□□□ 0.64
APP-202ENST00000348990 BLMHQ13867 455 aa19.02■□□□□ 0.64
APP-202ENST00000348990 TSNAXIP1Q2TAA8 658 aa19.02■□□□□ 0.64
APP-202ENST00000348990 FBXO11Q86XK2 927 aa19.02■□□□□ 0.64
APP-202ENST00000348990 CRAMP1Q96RY5 1269 aa19.02■□□□□ 0.64
APP-202ENST00000348990 PCDHB18PQ96TA0 734 aa19.02■□□□□ 0.64
APP-202ENST00000348990 AMNQ9BXJ7 453 aa19.02■□□□□ 0.64
APP-202ENST00000348990 DDX4Q9NQI0 724 aaKnown RBP19.02■□□□□ 0.64
APP-202ENST00000348990 ANAPC7Q9UJX3 599 aa19.02■□□□□ 0.64
APP-202ENST00000348990 CORO1CQ9ULV4 474 aaPredicted RBP19.02■□□□□ 0.64
APP-202ENST00000348990 USTQ9Y2C2 406 aa19.02■□□□□ 0.64
APP-202ENST00000348990 EXOC1LA0A1B0GW35 172 aa19.02■□□□□ 0.64
APP-202ENST00000348990 CALCAP01258 141 aa19.02■□□□□ 0.64
APP-202ENST00000348990 ALADP13716 330 aa19.02■□□□□ 0.64
APP-202ENST00000348990 ABL2P42684 1182 aa19.02■□□□□ 0.64
APP-202ENST00000348990 PEX5P50542 639 aa19.02■□□□□ 0.64
APP-202ENST00000348990 SLC47A2Q86VL8 602 aa19.02■□□□□ 0.64
APP-202ENST00000348990 LRRC8CQ8TDW0 803 aa19.02■□□□□ 0.64
APP-202ENST00000348990 MAGEB18Q96M61 343 aa19.02■□□□□ 0.64
APP-202ENST00000348990 MEIS2O14770 477 aa19.02■□□□□ 0.63
APP-202ENST00000348990 CDH16O75309 829 aa19.02■□□□□ 0.63
APP-202ENST00000348990 AP1G2O75843 785 aa19.02■□□□□ 0.63
APP-202ENST00000348990 OAS1P00973 400 aaKnown RBP19.02■□□□□ 0.63
APP-202ENST00000348990 SNHG28P0DPA3 235 aa19.02■□□□□ 0.63
APP-202ENST00000348990 ITIH2P19823 946 aa19.02■□□□□ 0.63
APP-202ENST00000348990 CA4P22748 312 aa19.02■□□□□ 0.63
APP-202ENST00000348990 MAPK4P31152 587 aa19.02■□□□□ 0.63
APP-202ENST00000348990 FOXN2P32314 431 aa19.02■□□□□ 0.63
APP-202ENST00000348990 SPIRE1Q08AE8 756 aa19.02■□□□□ 0.63
APP-202ENST00000348990 HHATQ5VTY9 493 aa19.02■□□□□ 0.63
APP-202ENST00000348990 RPS6KC1Q96S38 1066 aa19.02■□□□□ 0.63
APP-202ENST00000348990 VPS37BQ9H9H4 285 aa19.02■□□□□ 0.63
APP-202ENST00000348990 CPSF2Q9P2I0 782 aaKnown RBP19.02■□□□□ 0.63
APP-202ENST00000348990 DCTN4Q9UJW0 460 aa19.02■□□□□ 0.63
APP-202ENST00000348990 ARHGEF35A5YM69 484 aa19.01■□□□□ 0.63
APP-202ENST00000348990 ENTPD5O75356 428 aa19.01■□□□□ 0.63
APP-202ENST00000348990 TM4SF1P30408 202 aa19.01■□□□□ 0.63
APP-202ENST00000348990 ERFP50548 548 aa19.01■□□□□ 0.63
APP-202ENST00000348990 RBM5P52756 815 aaKnown RBP eCLIP19.01■□□□□ 0.63
APP-202ENST00000348990 MTFR1Q15390 333 aa19.01■□□□□ 0.63
APP-202ENST00000348990 DAB2IPQ5VWQ8 1189 aa19.01■□□□□ 0.63
APP-202ENST00000348990 KIAA1683Q9H0B3 1180 aa19.01■□□□□ 0.63
APP-202ENST00000348990 NINJ2Q9NZG7 142 aa19.01■□□□□ 0.63
APP-202ENST00000348990 NARFQ9UHQ1 456 aa19.01■□□□□ 0.63
APP-202ENST00000348990 PHTF1Q9UMS5 762 aa19.01■□□□□ 0.63
APP-202ENST00000348990 DPPA5A6NC42 116 aa19.01■□□□□ 0.63
APP-202ENST00000348990 KIF3CO14782 793 aa19.01■□□□□ 0.63
APP-202ENST00000348990 RBBP5Q15291 538 aaKnown RBP19.01■□□□□ 0.63
APP-202ENST00000348990 CNBD1Q8NA66 436 aa19.01■□□□□ 0.63
APP-202ENST00000348990 TTC8Q8TAM2 541 aa19.01■□□□□ 0.63
APP-202ENST00000348990 SLC5A5Q92911 643 aa19.01■□□□□ 0.63
APP-202ENST00000348990 FAM20AQ96MK3 541 aa19.01■□□□□ 0.63
APP-202ENST00000348990 P2RX7Q99572 595 aaKnown RBP19.01■□□□□ 0.63
APP-202ENST00000348990 RNPEPL1Q9HAU8 725 aa19.01■□□□□ 0.63
APP-202ENST00000348990 AAASQ9NRG9 546 aa19.01■□□□□ 0.63
APP-202ENST00000348990 TAC1P20366 129 aa19.01■□□□□ 0.63
APP-202ENST00000348990 ATP4AP20648 1035 aa19.01■□□□□ 0.63
APP-202ENST00000348990 MKRN3Q13064 507 aaKnown RBP19.01■□□□□ 0.63
APP-202ENST00000348990 ZNF720Q7Z2F6 126 aa19.01■□□□□ 0.63
APP-202ENST00000348990 NOP9Q86U38 636 aaKnown RBP19.01■□□□□ 0.63
APP-202ENST00000348990 CNKSR1Q969H4 720 aa19.01■□□□□ 0.63
APP-202ENST00000348990 OLFML3Q9NRN5 406 aa19.01■□□□□ 0.63
APP-202ENST00000348990 FAM47DPA6NHR8 397 aa19■□□□□ 0.63
APP-202ENST00000348990 GAS7O60861 476 aa19■□□□□ 0.63
APP-202ENST00000348990 CETPP11597 493 aa19■□□□□ 0.63
APP-202ENST00000348990 CALB2P22676 271 aa19■□□□□ 0.63
APP-202ENST00000348990 KIF22Q14807 665 aa19■□□□□ 0.63
APP-202ENST00000348990 BMT2Q1RMZ1 405 aa19■□□□□ 0.63
APP-202ENST00000348990 APBB1IPQ7Z5R6 666 aaPredicted RBP19■□□□□ 0.63
APP-202ENST00000348990 BORCS6Q96GS4 357 aa19■□□□□ 0.63
APP-202ENST00000348990 TNKS1BP1Q9C0C2 1729 aaKnown RBP19■□□□□ 0.63
APP-202ENST00000348990 CHRNB2P17787 502 aa19■□□□□ 0.63
APP-202ENST00000348990 VAMP7P51809 220 aa19■□□□□ 0.63
APP-202ENST00000348990 TMEM154Q6P9G4 183 aa19■□□□□ 0.63
APP-202ENST00000348990 SAYSD1Q9NPB0 183 aa19■□□□□ 0.63
APP-202ENST00000348990 SHANK3Q9BYB0 1731 aa19■□□□□ 0.63
APP-202ENST00000348990 KIAA1551Q9HCM1 1747 aa19■□□□□ 0.63
APP-202ENST00000348990 MXI1P50539 228 aa18.99■□□□□ 0.63
APP-202ENST00000348990 ZBTB16Q05516 673 aa18.99■□□□□ 0.63
APP-202ENST00000348990 PPP3CAQ08209 521 aa18.99■□□□□ 0.63
APP-202ENST00000348990 AP3B2Q13367 1082 aa18.99■□□□□ 0.63
APP-202ENST00000348990 TAB3Q8N5C8 712 aaPredicted RBP18.99■□□□□ 0.63
APP-202ENST00000348990 MKNK1Q9BUB5 465 aa18.99■□□□□ 0.63
APP-202ENST00000348990 WHRNQ9P202 907 aa18.99■□□□□ 0.63
APP-202ENST00000348990 PCDHA3Q9Y5H8 950 aa18.99■□□□□ 0.63
APP-202ENST00000348990 POLE2P56282 527 aa18.99■□□□□ 0.63
APP-202ENST00000348990 IZUMO3Q5VZ72 239 aa18.99■□□□□ 0.63
APP-202ENST00000348990 KAZNQ674X7 775 aa18.99■□□□□ 0.63
APP-202ENST00000348990 SLC30A9Q6PML9 568 aa18.99■□□□□ 0.63
APP-202ENST00000348990 FAM13CQ8NE31 585 aa18.99■□□□□ 0.63
APP-202ENST00000348990 OLIG1Q8TAK6 271 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms