RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 CATSPER3Q86XQ3 398 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 IFT20Q8IY31 132 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 C4orf32Q8N8J7 132 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 GIMAP8Q8ND71 665 aaPredicted RBP11.11□□□□□ -0.63
ABCF1-201ENST00000326195 TAF4BQ92750 862 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 KRT12Q99456 494 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 LXNQ9BS40 222 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 FAM49AQ9H0Q0 323 aaPredicted RBP11.11□□□□□ -0.63
ABCF1-201ENST00000326195 AGO4Q9HCK5 861 aaKnown RBP11.11□□□□□ -0.63
ABCF1-201ENST00000326195 KCNMB3Q9NPA1 279 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 GPRC5CQ9NQ84 441 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 SLC9A2Q9UBY0 812 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 CORO1CQ9ULV4 474 aaPredicted RBP11.11□□□□□ -0.63
ABCF1-201ENST00000326195 OTOFQ9HC10 1997 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 PIK3CDO00329 1044 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 ADCY6O43306 1168 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 BUB1O43683 1085 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 STRNO43815 780 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 GJB1P08034 283 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 ACTR2P61160 394 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 ZNF844Q08AG5 666 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 USP4Q13107 963 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 TTLL4Q14679 1199 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 CXCL17Q6UXB2 119 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 CPLX4Q7Z7G2 160 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 ERICH1Q86X53 443 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 KSR1Q8IVT5 923 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 CCDC65Q8IXS2 484 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 OR6J1Q8NGC5 347 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 FGD4Q96M96 766 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 MPHOSPH6Q99547 160 aaKnown RBP11.11□□□□□ -0.63
ABCF1-201ENST00000326195 KDM4CQ9H3R0 1056 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 PAPPA2Q9BXP8 1791 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 A6NHS1 94 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 CCT8L1PA6NM43 557 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 LGR5O75473 907 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 TCF7P36402 384 aaPredicted RBP11.11□□□□□ -0.63
ABCF1-201ENST00000326195 PRPHP41219 470 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 PAK2Q13177 524 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 RAPGEF1Q13905 1077 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 OLFML2BQ68BL8 750 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 MYOCDQ8IZQ8 938 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 LRRC71Q8N4P6 559 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 CCDC63Q8NA47 563 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 TRIM58Q8NG06 486 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 RNF208Q9H0X6 261 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 AZI2Q9H6S1 392 aa11.11□□□□□ -0.63
ABCF1-201ENST00000326195 WRAP73Q9P2S5 460 aaPredicted RBP11.11□□□□□ -0.63
ABCF1-201ENST00000326195 NOVA2Q9UNW9 492 aaKnown RBP11.11□□□□□ -0.63
ABCF1-201ENST00000326195 ODF2Q5BJF6 829 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 CCDC170Q8IYT3 715 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 MREGQ8N565 214 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 NEUROG2Q9H2A3 272 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 HOMER3Q9NSC5 361 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 MORF4L1Q9UBU8 362 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 PACSIN2Q9UNF0 486 aaPredicted RBP11.1□□□□□ -0.63
ABCF1-201ENST00000326195 DPPA5A6NC42 116 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 ASB14A6NK59 587 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 SMPD1P17405 629 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 ECHS1P30084 290 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 BLMHQ13867 455 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 SLC9C1Q4G0N8 1177 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 GKAP1Q5VSY0 366 aaPredicted RBP11.1□□□□□ -0.63
ABCF1-201ENST00000326195 OTOP1Q7RTM1 612 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 GPBP1Q86WP2 473 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 CCDC60Q8IWA6 550 aaPredicted RBP11.1□□□□□ -0.63
ABCF1-201ENST00000326195 KCNV2Q8TDN2 545 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 CEP170P1Q96L14 293 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 KBTBD4Q9NVX7 518 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 PCDHA13Q9Y5I0 950 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 ATP2A1O14983 1001 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 MAN2A1Q16706 1144 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 CRELD2Q6UXH1 353 aaPredicted RBP11.1□□□□□ -0.63
ABCF1-201ENST00000326195 ETNPPLQ8TBG4 499 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 LRRC15Q8TF66 581 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 DEFB118Q96PH6 123 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 MTMR9Q96QG7 549 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 KIFC3Q9BVG8 833 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 ARHGAP20Q9P2F6 1191 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 STK17AQ9UEE5 414 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 SLC12A4Q9UP95 1085 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 HYOU1Q9Y4L1 999 aa11.1□□□□□ -0.63
ABCF1-201ENST00000326195 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.1□□□□□ -0.63
ABCF1-201ENST00000326195 RSPH10B2B2RC85 870 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 EPHB6O15197 1021 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 RTN3O95197 1032 aaPredicted RBP11.09□□□□□ -0.63
ABCF1-201ENST00000326195 RSPH10BP0C881 870 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 MYZAPP0CAP1 466 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 GNAT1P11488 350 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 HARSP12081 509 aaKnown RBP11.09□□□□□ -0.63
ABCF1-201ENST00000326195 PRLRP16471 622 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 ATP4AP20648 1035 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 MAGOHP61326 146 aaKnown RBP11.09□□□□□ -0.63
ABCF1-201ENST00000326195 CACNB2Q08289 660 aaPredicted RBP11.09□□□□□ -0.63
ABCF1-201ENST00000326195 GRB14Q14449 540 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 TMEM132AQ24JP5 1023 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 FAM26FQ5R3K3 315 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 FAM102BQ5T8I3 360 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 KLHDC7AQ5VTJ3 777 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 MFSD14CQ5VZR4 134 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms