RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 TBX20Q9UMR3 447 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 PFASO15067 1338 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 CLDN3O15551 220 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 MFAP3P55082 362 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 DAB2IPQ5VWQ8 1189 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 LMBRD2Q68DH5 695 aaPredicted RBP16.23■□□□□ 0.19
CSDC2-201ENST00000306149 CPLX4Q7Z7G2 160 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 SLC13A5Q86YT5 568 aaPredicted RBP16.23■□□□□ 0.19
CSDC2-201ENST00000306149 TEX2Q8IWB9 1127 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 TMEM161BQ8NDZ6 487 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 EPS8L3Q8TE67 593 aaKnown RBP16.23■□□□□ 0.19
CSDC2-201ENST00000306149 SHC3Q92529 594 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 SEC16BQ96JE7 1060 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 RPS6KC1Q96S38 1066 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 PDGFDQ9GZP0 370 aaPredicted RBP16.23■□□□□ 0.19
CSDC2-201ENST00000306149 PCDHA3Q9Y5H8 950 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 CTNND1O60716 968 aaKnown RBP16.22■□□□□ 0.19
CSDC2-201ENST00000306149 MAPTP10636 758 aaKnown RBP16.22■□□□□ 0.19
CSDC2-201ENST00000306149 KRT5P13647 590 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 CHN1P15882 459 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 DRG2P55039 364 aaKnown RBP16.22■□□□□ 0.19
CSDC2-201ENST00000306149 ALCAMQ13740 583 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 PGM5Q15124 567 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 CCDC38Q502W7 563 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 KRT39Q6A163 491 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 ANO5Q75V66 913 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 CACNA2D3Q8IZS8 1091 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 RMDN3Q96TC7 470 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 A1CFQ9NQ94 594 aaKnown RBP16.22■□□□□ 0.19
CSDC2-201ENST00000306149 PCYOX1Q9UHG3 505 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 RASSF9O75901 435 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 GZMAP12544 262 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 COILP38432 576 aaPredicted RBP16.22■□□□□ 0.19
CSDC2-201ENST00000306149 NCKAP1LP55160 1127 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 BYSLQ13895 437 aaKnown RBP16.22■□□□□ 0.19
CSDC2-201ENST00000306149 TCEAL1Q15170 157 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 P3H4Q92791 437 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 WNK4Q96J92 1243 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 OSBPL7Q9BZF2 842 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 CCDC113Q9H0I3 377 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 WNT8AQ9H1J5 351 aa16.22■□□□□ 0.19
CSDC2-201ENST00000306149 HSPA6P17066 643 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 PSMC5P62195 406 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 SIX1Q15475 284 aaPredicted RBP16.21■□□□□ 0.19
CSDC2-201ENST00000306149 SLC39A4Q6P5W5 647 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 POMGNT1Q8WZA1 660 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 DEFB129Q9H1M3 183 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 TBC1D22BQ9NU19 505 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 DNAJC17Q9NVM6 304 aaKnown RBP16.21■□□□□ 0.19
CSDC2-201ENST00000306149 ZNFX1Q9P2E3 1918 aaKnown RBP16.21■□□□□ 0.19
CSDC2-201ENST00000306149 COL4A5P29400 1685 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 SSTR3P32745 418 aaPredicted RBP16.21■□□□□ 0.19
CSDC2-201ENST00000306149 PDE6CP51160 858 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 TRIP13Q15645 432 aaPredicted RBP16.21■□□□□ 0.19
CSDC2-201ENST00000306149 ANKRD20A8PQ5CZ79 823 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 ERMARDQ5T6L9 678 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 SV2AQ7L0J3 742 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 MCF2L2Q86YR7 1114 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 C4orf19Q8IY42 314 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 ATG4AQ8WYN0 398 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 PGM2Q96G03 612 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 XPO6Q96QU8 1125 aaKnown RBP16.21■□□□□ 0.19
CSDC2-201ENST00000306149 FAM129AQ9BZQ8 928 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 MTFR1LQ9H019 292 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 KMT5AQ9NQR1 393 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 RAB20Q9NX57 234 aa16.21■□□□□ 0.19
CSDC2-201ENST00000306149 GOLGA6L7A0A1B0GV03 622 aa16.21■□□□□ 0.18
CSDC2-201ENST00000306149 WNT10BO00744 389 aa16.21■□□□□ 0.18
CSDC2-201ENST00000306149 RGS16O15492 202 aaPredicted RBP16.21■□□□□ 0.18
CSDC2-201ENST00000306149 TBC1D12O60347 775 aa16.21■□□□□ 0.18
CSDC2-201ENST00000306149 CYP1A2P05177 515 aa16.21■□□□□ 0.18
CSDC2-201ENST00000306149 DRD4P21917 467 aa16.21■□□□□ 0.18
CSDC2-201ENST00000306149 GBP1P32455 592 aa16.21■□□□□ 0.18
CSDC2-201ENST00000306149 CDR2Q01850 454 aa16.21■□□□□ 0.18
CSDC2-201ENST00000306149 GKAP1Q5VSY0 366 aaPredicted RBP16.21■□□□□ 0.18
CSDC2-201ENST00000306149 RNF207Q6ZRF8 634 aa16.21■□□□□ 0.18
CSDC2-201ENST00000306149 CCDC91Q7Z6B0 441 aa16.21■□□□□ 0.18
CSDC2-201ENST00000306149 NT5C1BQ96P26 610 aa16.21■□□□□ 0.18
CSDC2-201ENST00000306149 ADAM7Q9H2U9 754 aa16.21■□□□□ 0.18
CSDC2-201ENST00000306149 DNM1LO00429 736 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 PODXLO00592 558 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 PPP1R7Q15435 360 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 LACTB2Q53H82 288 aaPredicted RBP16.2■□□□□ 0.18
CSDC2-201ENST00000306149 FBXL13Q8NEE6 735 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 CPA5Q8WXQ8 436 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 DDX1Q92499 740 aaKnown RBP16.2■□□□□ 0.18
CSDC2-201ENST00000306149 PDCD2LQ9BRP1 358 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 MTRF1LQ9UGC7 380 aaKnown RBP16.2■□□□□ 0.18
CSDC2-201ENST00000306149 GTF3C4Q9UKN8 822 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 RIPK3Q9Y572 518 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 ADGRA3Q8IWK6 1321 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 FOXO6A8MYZ6 492 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 GRIN3BO60391 1043 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 LYPLA2O95372 231 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 RWDD2BP57060 319 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 DMP1Q13316 513 aaPredicted RBP16.2■□□□□ 0.18
CSDC2-201ENST00000306149 NIPA1Q7RTP0 329 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 VTI1AQ96AJ9 217 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 CEP170P1Q96L14 293 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 FAM118BQ9BPY3 351 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms