RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ZCWPW1Q9H0M4 648 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 ABCB6Q9NP58 842 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 KLHL11Q9NVR0 708 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14□□□□□ -0.17
COL1A1-201ENST00000225964 HMOX2P30519 316 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 HSD17B4P51659 736 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 SNX17Q15036 470 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 MLXIPLQ9NP71 852 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 BARHL2Q9NY43 387 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 RRP15Q9Y3B9 282 aaKnown RBP14□□□□□ -0.17
COL1A1-201ENST00000225964 ADRA2BP18089 450 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 CYP2B6P20813 491 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 SNAPC2Q13487 334 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 CATSPER3Q86XQ3 398 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 MARCH10Q8NA82 808 aaPredicted RBP14□□□□□ -0.17
COL1A1-201ENST00000225964 FAM96AQ9H5X1 160 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 LY9Q9HBG7 655 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 ACTR5Q9H9F9 607 aaPredicted RBP14□□□□□ -0.17
COL1A1-201ENST00000225964 CNOT7Q9UIV1 285 aaKnown RBP14□□□□□ -0.17
COL1A1-201ENST00000225964 AP3M2P53677 418 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 SP8Q8IXZ3 490 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 RUBCNLQ9H714 662 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 SPON1Q9HCB6 807 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 SYTL2Q9HCH5 934 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 PCDHA10Q9Y5I2 948 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 ZNF263O14978 683 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 MEFVO15553 781 aaPredicted RBP13.99□□□□□ -0.17
COL1A1-201ENST00000225964 KCNN4O15554 427 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 ATP1A3P13637 1013 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 DEUP1Q05D60 604 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 PARK7Q99497 189 aaKnown RBP13.99□□□□□ -0.17
COL1A1-201ENST00000225964 STK36Q9NRP7 1315 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 LGALS16A8MUM7 142 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 TFRCP02786 760 aaKnown RBP13.99□□□□□ -0.17
COL1A1-201ENST00000225964 MGAT5BQ3V5L5 792 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 PDXDC1Q6P996 788 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 OR9Q1Q8NGQ5 310 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 SNF8Q96H20 258 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 WNT8AQ9H1J5 351 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 AGAP1Q9UPQ3 857 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 NCK2O43639 380 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 TDP2O95551 362 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 NT5C2P49902 561 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 TAP1Q03518 808 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 PDCLQ13371 301 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 CCDC157Q569K6 752 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 TRIM72Q6ZMU5 477 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 DCTN4Q9UJW0 460 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 ATP8B1O43520 1251 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 RARBP10826 455 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 RGS7P49802 495 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 ARHGEF7Q14155 803 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 RHOT1Q8IXI2 618 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 CLMNQ96JQ2 1002 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 BFARQ9NZS9 450 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 ARHGEF5Q12774 1597 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 CASP8Q14790 479 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 BEND6Q5SZJ8 279 aaPredicted RBP13.99□□□□□ -0.17
COL1A1-201ENST00000225964 NUDCD3Q8IVD9 361 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 STKLD1Q8NE28 680 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 TMEM143Q96AN5 459 aa13.99□□□□□ -0.17
COL1A1-201ENST00000225964 GFAPP14136 432 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 GUCY2CP25092 1073 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 EIF3EP60228 445 aaKnown RBP13.98□□□□□ -0.17
COL1A1-201ENST00000225964 PRKCQQ04759 706 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 R3HDM1Q15032 1099 aaKnown RBP13.98□□□□□ -0.17
COL1A1-201ENST00000225964 KIZQ2M2Z5 673 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 ARMC6Q6NXE6 501 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 SNX31Q8N9S9 440 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 ELMO2Q96JJ3 720 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 AGAP3Q96P47 875 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 C5orf58C9J3I9 102 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 TRIM49P0CI25 452 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 TRIM49CP0CI26 452 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 TMEM132DQ14C87 1099 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 C1orf54Q8WWF1 131 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 ARL8AQ96BM9 186 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 UNC45AQ9H3U1 944 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 SPATA31A3Q5VYP0 1347 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 GH1P01241 217 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 OR1G1P47890 313 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 RAP1GDS1P52306 607 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 EFNA5P52803 228 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 OCA2Q04671 838 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 TEDDM1Q5T9Z0 273 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 IER5Q5VY09 327 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 ATPAF2Q8N5M1 289 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 BTN2A2Q8WVV5 523 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 HERC5Q9UII4 1024 aaKnown RBP13.98□□□□□ -0.17
COL1A1-201ENST00000225964 MAP3K4Q9Y6R4 1608 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 RPS6KA5O75582 802 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 PDGFRBP09619 1106 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 HSPA1AP0DMV8 641 aaKnown RBP13.98□□□□□ -0.17
COL1A1-201ENST00000225964 HSPA1BP0DMV9 641 aaKnown RBP13.98□□□□□ -0.17
COL1A1-201ENST00000225964 ITGA4P13612 1032 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 COBLL1Q53SF7 1204 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 GSPT2Q8IYD1 628 aaKnown RBP13.98□□□□□ -0.17
COL1A1-201ENST00000225964 PP2D1A8MPX8 630 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 POLRMTO00411 1230 aaKnown RBP13.98□□□□□ -0.17
COL1A1-201ENST00000225964 PJA2O43164 708 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms