RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 MYO1AQ9UBC5 1043 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 RBAK-RBAKDNI3L0D1 243 aa19.64■□□□□ 0.73
VIM-201ENST00000224237 HAS3O00219 553 aa19.64■□□□□ 0.73
VIM-201ENST00000224237 ZNF263O14978 683 aa19.64■□□□□ 0.73
VIM-201ENST00000224237 KRT86O43790 486 aa19.64■□□□□ 0.73
VIM-201ENST00000224237 HARSP12081 509 aaKnown RBP19.64■□□□□ 0.73
VIM-201ENST00000224237 ELNP15502 786 aa19.64■□□□□ 0.73
VIM-201ENST00000224237 SOX5P35711 763 aa19.64■□□□□ 0.73
VIM-201ENST00000224237 CYP27A1Q02318 531 aa19.64■□□□□ 0.73
VIM-201ENST00000224237 DRAP1Q14919 205 aaPredicted RBP19.64■□□□□ 0.73
VIM-201ENST00000224237 FSCN1Q16658 493 aaKnown RBP19.64■□□□□ 0.73
VIM-201ENST00000224237 SV2AQ7L0J3 742 aa19.64■□□□□ 0.73
VIM-201ENST00000224237 ZNF410Q86VK4 478 aa19.64■□□□□ 0.73
VIM-201ENST00000224237 TXLNBQ8N3L3 684 aa19.64■□□□□ 0.73
VIM-201ENST00000224237 CFHR5Q9BXR6 569 aa19.64■□□□□ 0.73
VIM-201ENST00000224237 IFIH1Q9BYX4 1025 aaKnown RBP19.64■□□□□ 0.73
VIM-201ENST00000224237 TSGA10Q9BZW7 698 aa19.64■□□□□ 0.73
VIM-201ENST00000224237 MINDY3Q9H8M7 445 aa19.64■□□□□ 0.73
VIM-201ENST00000224237 MYADML2A6NDP7 307 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 ABLIM1O14639 778 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 OGTO15294 1046 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 FAM189A1O60320 539 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 MYL3P08590 195 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 CCDC172P0C7W6 258 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 TNNI1P19237 187 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 ANXA13P27216 316 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 PSEN2P49810 448 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 TMEM132AQ24JP5 1023 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 ZBTB41Q5SVQ8 909 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 C15orf39Q6ZRI6 1047 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 BRSK2Q8IWQ3 736 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 MYRIPQ8NFW9 859 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 NLRP7Q8WX94 980 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 JAKMIP2Q96AA8 810 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 PTPRHQ9HD43 1115 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 RAB20Q9NX57 234 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 TNFSF13BQ9Y275 285 aa19.63■□□□□ 0.73
VIM-201ENST00000224237 UQCRHLA0A096LP55 91 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 UQCRHP07919 91 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 CDC42EP1Q00587 391 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 GFPT1Q06210 699 aaPredicted RBP19.62■□□□□ 0.73
VIM-201ENST00000224237 SLC18A3Q16572 532 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 ZNF568Q3ZCX4 644 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 CCDC122Q5T0U0 273 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 ZBTB33Q86T24 672 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 KIAA0319LQ8IZA0 1049 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 TAS1R2Q8TE23 839 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 GPR88Q9GZN0 384 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 PDE11AQ9HCR9 933 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 UBE2TQ9NPD8 197 aaPredicted RBP19.62■□□□□ 0.73
VIM-201ENST00000224237 LUC7LQ9NQ29 371 aaKnown RBP19.62■□□□□ 0.73
VIM-201ENST00000224237 PCDHA13Q9Y5I0 950 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 CNTNAP2Q9UHC6 1331 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 MBLAC1A4D2B0 266 aaPredicted RBP19.62■□□□□ 0.73
VIM-201ENST00000224237 EVI5O60447 810 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 IQCF3P0C7M6 154 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 PTK2Q05397 1052 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 KIF5AQ12840 1032 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 ENOX2Q16206 610 aaKnown RBP19.62■□□□□ 0.73
VIM-201ENST00000224237 SEMA4DQ92854 862 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 SCLT1Q96NL6 688 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 WDR24Q96S15 920 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 CGRRF1Q99675 332 aa19.62■□□□□ 0.73
VIM-201ENST00000224237 IRX2Q9BZI1 471 aaPredicted RBP19.62■□□□□ 0.73
VIM-201ENST00000224237 SMIM35A0A1B0GVV1 85 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 DYNC1I1O14576 645 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 B4GALT5O43286 388 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 KPNA6O60684 536 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 ZC3H11AO75152 810 aaKnown RBP eCLIP19.61■□□□□ 0.73
VIM-201ENST00000224237 GFPT2O94808 682 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 CASQ1P31415 396 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 MAP2K2P36507 400 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 GJA9P57773 515 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 CACNB2Q08289 660 aaPredicted RBP19.61■□□□□ 0.73
VIM-201ENST00000224237 ARHGAP44Q17R89 818 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 ZACNQ401N2 412 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 SRGAP1Q7Z6B7 1085 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 VPS36Q86VN1 386 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 ARHGEF19Q8IW93 802 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 ZNF516Q92618 1163 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.61■□□□□ 0.73
VIM-201ENST00000224237 GUCA1BQ9UMX6 200 aa19.61■□□□□ 0.73
VIM-201ENST00000224237 LRRN2O75325 713 aa19.6■□□□□ 0.73
VIM-201ENST00000224237 ABL1P00519 1130 aa19.6■□□□□ 0.73
VIM-201ENST00000224237 C4BPAP04003 597 aaKnown RBP19.6■□□□□ 0.73
VIM-201ENST00000224237 C6orf222P0C671 652 aaPredicted RBP19.6■□□□□ 0.73
VIM-201ENST00000224237 MAGEA1P43355 309 aa19.6■□□□□ 0.73
VIM-201ENST00000224237 WNT7BP56706 349 aa19.6■□□□□ 0.73
VIM-201ENST00000224237 PURAQ00577 322 aaKnown RBP19.6■□□□□ 0.73
VIM-201ENST00000224237 HIC1Q14526 733 aa19.6■□□□□ 0.73
VIM-201ENST00000224237 SURF1Q15526 300 aa19.6■□□□□ 0.73
VIM-201ENST00000224237 AMHR2Q16671 573 aa19.6■□□□□ 0.73
VIM-201ENST00000224237 ZNF571Q7Z3V5 609 aaPredicted RBP19.6■□□□□ 0.73
VIM-201ENST00000224237 NT5C1BQ96P26 610 aa19.6■□□□□ 0.73
VIM-201ENST00000224237 ADAMTS1Q9UHI8 967 aa19.6■□□□□ 0.73
VIM-201ENST00000224237 CPSF3Q9UKF6 684 aaKnown RBP19.6■□□□□ 0.73
VIM-201ENST00000224237 RIOK3O14730 519 aaKnown RBP19.6■□□□□ 0.73
VIM-201ENST00000224237 FANCGO15287 622 aa19.6■□□□□ 0.73
VIM-201ENST00000224237 SEPT4O43236 478 aa19.6■□□□□ 0.73
VIM-201ENST00000224237 CSDE1O75534 798 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 547.2 ms