RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B YPL162CQ12042 273 aa-0.44□□□□□ -2.48
snR39BsnR39B SMT3Q12306 101 aaKnown RBP-0.44□□□□□ -2.48
snR39BsnR39B RNA15P25299 296 aaPredicted RBP-0.45□□□□□ -2.48
snR39BsnR39B MDH3P32419 343 aaKnown RBP RIP-Chip data-0.45□□□□□ -2.48not detected
snR39BsnR39B CSG2P35206 410 aa-0.45□□□□□ -2.48
snR39BsnR39B PRP39P39682 629 aaKnown RBP-0.45□□□□□ -2.48
snR39BsnR39B TAF6P53040 516 aa-0.45□□□□□ -2.48
snR39BsnR39B YNR068CP53754 272 aa-0.45□□□□□ -2.48
snR39BsnR39B SNX41Q04053 625 aa-0.45□□□□□ -2.48
snR39BsnR39B QCR8P08525 94 aa-0.46□□□□□ -2.48
snR39BsnR39B AEP1P32493 518 aa-0.46□□□□□ -2.48
snR39BsnR39B YER076CP40049 302 aa-0.46□□□□□ -2.48
snR39BsnR39B BTT1P40314 149 aaPredicted RBP-0.46□□□□□ -2.48
snR39BsnR39B UBC13P52490 153 aa-0.46□□□□□ -2.48
snR39BsnR39B LOA1Q06508 300 aa-0.46□□□□□ -2.48
snR39BsnR39B YDL121CQ07541 149 aa-0.46□□□□□ -2.48
snR39BsnR39B FLO9P39712 1322 aa-0.46□□□□□ -2.48
snR39BsnR39B RPS3P05750 240 aaKnown RBP-0.47□□□□□ -2.48
snR39BsnR39B FAA1P30624 700 aaKnown RBP-0.47□□□□□ -2.48
snR39BsnR39B ACB1P31787 87 aa-0.47□□□□□ -2.48
snR39BsnR39B HMX1P32339 317 aa-0.47□□□□□ -2.48
snR39BsnR39B RNP1P32385 249 aa-0.47□□□□□ -2.48
snR39BsnR39B VPH1P32563 840 aaKnown RBP-0.47□□□□□ -2.48
snR39BsnR39B HMT1P38074 348 aa-0.47□□□□□ -2.48
snR39BsnR39B CTR2P38865 189 aa-0.47□□□□□ -2.48
snR39BsnR39B RCY1P39531 840 aa-0.47□□□□□ -2.48
snR39BsnR39B SEN34P39707 275 aa-0.47□□□□□ -2.48
snR39BsnR39B MLC1P53141 149 aa-0.47□□□□□ -2.48
snR39BsnR39B FMP41P53889 259 aaKnown RBP-0.47□□□□□ -2.48
snR39BsnR39B YMR310CQ04867 317 aaPredicted RBP-0.47□□□□□ -2.48
snR39BsnR39B SML1Q04964 104 aa-0.47□□□□□ -2.48
snR39BsnR39B USB1Q12208 290 aaKnown RBP-0.47□□□□□ -2.48
snR39BsnR39B ATO3Q12359 275 aa-0.47□□□□□ -2.48
snR39BsnR39B SWI3P32591 825 aa-0.48□□□□□ -2.49
snR39BsnR39B TEM1P38987 245 aa-0.48□□□□□ -2.49
snR39BsnR39B RIO2P40160 425 aaKnown RBP-0.48□□□□□ -2.49
snR39BsnR39B YKE4P40544 346 aa-0.48□□□□□ -2.49
snR39BsnR39B NIF3P53081 288 aa-0.48□□□□□ -2.49
snR39BsnR39B TAZ1Q06510 381 aa-0.48□□□□□ -2.49
snR39BsnR39B LCL2Q08045 131 aa-0.48□□□□□ -2.49
snR39BsnR39B UTP23Q12339 254 aaKnown RBP-0.48□□□□□ -2.49
snR39BsnR39B RGS2Q99188 309 aa-0.48□□□□□ -2.49
snR39BsnR39B YHR032W-AP0C5N6 59 aa-0.49□□□□□ -2.49
snR39BsnR39B UBA1P22515 1024 aaKnown RBP-0.49□□□□□ -2.49
snR39BsnR39B RDS1P25611 832 aa-0.49□□□□□ -2.49
snR39BsnR39B ERV15P38312 142 aa-0.49□□□□□ -2.49
snR39BsnR39B YHR035WP38769 630 aa-0.49□□□□□ -2.49
snR39BsnR39B AGE2P40529 298 aa-0.49□□□□□ -2.49
snR39BsnR39B OST2P46964 130 aa-0.49□□□□□ -2.49
snR39BsnR39B YJL028WP47062 111 aa-0.49□□□□□ -2.49
snR39BsnR39B YGR219WP53307 113 aa-0.49□□□□□ -2.49
snR39BsnR39B MAL13P53338 473 aa-0.49□□□□□ -2.49
snR39BsnR39B SED1Q01589 338 aa-0.49□□□□□ -2.49
snR39BsnR39B IRC4Q03036 179 aa-0.49□□□□□ -2.49
snR39BsnR39B VPS20Q04272 221 aa-0.49□□□□□ -2.49
snR39BsnR39B YOR114WQ12219 294 aa-0.49□□□□□ -2.49
snR39BsnR39B YPR1Q12458 312 aa-0.49□□□□□ -2.49
snR39BsnR39B Q0255P03881 472 aa-0.5□□□□□ -2.49
snR39BsnR39B YLL053CP0CD98 152 aa-0.5□□□□□ -2.49
snR39BsnR39B RSR1P13856 272 aa-0.5□□□□□ -2.49
snR39BsnR39B UGA1P17649 471 aa-0.5□□□□□ -2.49
snR39BsnR39B PBN1P25580 416 aa-0.5□□□□□ -2.49
snR39BsnR39B UIP5P36137 443 aa-0.5□□□□□ -2.49
snR39BsnR39B ECM13P38195 257 aa-0.5□□□□□ -2.49
snR39BsnR39B BIG1P38813 335 aa-0.5□□□□□ -2.49
snR39BsnR39B SVP26P38869 228 aa-0.5□□□□□ -2.49
snR39BsnR39B ALP1P38971 573 aa-0.5□□□□□ -2.49
snR39BsnR39B SOK1P40317 901 aa-0.5□□□□□ -2.49
snR39BsnR39B GDS1P41913 522 aa-0.5□□□□□ -2.49
snR39BsnR39B AGX1P43567 385 aa-0.5□□□□□ -2.49
snR39BsnR39B MPP6P53725 186 aaPredicted RBP-0.5□□□□□ -2.49
snR39BsnR39B YML018CQ03730 393 aa-0.5□□□□□ -2.49
snR39BsnR39B VMA5P31412 392 aaKnown RBP-0.51□□□□□ -2.49
snR39BsnR39B OAC1P32332 324 aa-0.51□□□□□ -2.49
snR39BsnR39B MSB2P32334 1306 aa-0.51□□□□□ -2.49
snR39BsnR39B YIL001WP40560 513 aa-0.51□□□□□ -2.49
snR39BsnR39B SRB7P47822 140 aa-0.51□□□□□ -2.49
snR39BsnR39B TIM21P53220 239 aa-0.51□□□□□ -2.49
snR39BsnR39B SDC1Q03323 175 aa-0.51□□□□□ -2.49
snR39BsnR39B RVB1Q03940 463 aaKnown RBP-0.51□□□□□ -2.49
snR39BsnR39B EMI1Q04406 187 aa-0.51□□□□□ -2.49
snR39BsnR39B PST1Q12355 444 aa-0.51□□□□□ -2.49
snR39BsnR39B SPO24Q3E752 67 aa-0.51□□□□□ -2.49
snR39BsnR39B INH1P01097 85 aa-0.52□□□□□ -2.49
snR39BsnR39B TMA19P35691 167 aaKnown RBP-0.52□□□□□ -2.49
snR39BsnR39B YKL162CP36052 402 aa-0.52□□□□□ -2.49
snR39BsnR39B YSW1P38280 609 aa-0.52□□□□□ -2.49
snR39BsnR39B GDT1P38301 280 aaPredicted RBP-0.52□□□□□ -2.49
snR39BsnR39B INA22P40576 216 aa-0.52□□□□□ -2.49
snR39BsnR39B YGR026WP53217 278 aa-0.52□□□□□ -2.49
snR39BsnR39B OKP1P53298 406 aa-0.52□□□□□ -2.49
snR39BsnR39B DPP1Q05521 289 aa-0.52□□□□□ -2.49
snR39BsnR39B BUD21Q08492 214 aaPredicted RBP-0.52□□□□□ -2.49
snR39BsnR39B AKR2Q12013 749 aa-0.52□□□□□ -2.49
snR39BsnR39B PET494P07390 489 aaPredicted RBP-0.53□□□□□ -2.49
snR39BsnR39B RPL31AP0C2H8 113 aaKnown RBP-0.53□□□□□ -2.49
snR39BsnR39B ZRT1P32804 376 aa-0.53□□□□□ -2.49
snR39BsnR39B EBP2P36049 427 aaKnown RBP-0.53□□□□□ -2.49
snR39BsnR39B MAL32P38158 584 aa-0.53□□□□□ -2.49
snR39BsnR39B MPP10P47083 593 aaKnown RBP-0.53□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms